RNA–Protein interactions for RNA: ENST00000536997.1

MDM1-207, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-207ENST00000536997 AEBP2Q6ZN18 517 aaPredicted RBP31.66■■■□□ 2.66
MDM1-207ENST00000536997 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
MDM1-207ENST00000536997 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
MDM1-207ENST00000536997 PHF23Q9BUL5 403 aaPredicted RBP26.67■■□□□ 1.86
MDM1-207ENST00000536997 FOXD1Q16676 465 aa25.42■■□□□ 1.66
MDM1-207ENST00000536997 POTEDQ86YR6 584 aa25.1■■□□□ 1.61
MDM1-207ENST00000536997 MSH5O43196 834 aa24.15■■□□□ 1.46
MDM1-207ENST00000536997 PIAS4Q8N2W9 510 aaPredicted RBP23.55■■□□□ 1.36
MDM1-207ENST00000536997 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
MDM1-207ENST00000536997 ADRA2BP18089 450 aa22.94■■□□□ 1.26
MDM1-207ENST00000536997 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
MDM1-207ENST00000536997 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
MDM1-207ENST00000536997 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
MDM1-207ENST00000536997 CACNB1Q02641 598 aaPredicted RBP21.27■■□□□ 1
MDM1-207ENST00000536997 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
MDM1-207ENST00000536997 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
MDM1-207ENST00000536997 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
MDM1-207ENST00000536997 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
MDM1-207ENST00000536997 C1QBPQ07021 282 aaKnown RBP20.17■□□□□ 0.82
MDM1-207ENST00000536997 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
MDM1-207ENST00000536997 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
MDM1-207ENST00000536997 CNKSR2Q8WXI2 1034 aa19.81■□□□□ 0.76
MDM1-207ENST00000536997 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
MDM1-207ENST00000536997 POTEHQ6S545 545 aa19.5■□□□□ 0.71
MDM1-207ENST00000536997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
MDM1-207ENST00000536997 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
MDM1-207ENST00000536997 DSG3P32926 999 aa18.91■□□□□ 0.62
MDM1-207ENST00000536997 CAPN15O75808 1086 aa18.8■□□□□ 0.6
MDM1-207ENST00000536997 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
MDM1-207ENST00000536997 U3KPZ7 1027 aaPredicted RBP18.79■□□□□ 0.6
MDM1-207ENST00000536997 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
MDM1-207ENST00000536997 ABCB7O75027 752 aa18.28■□□□□ 0.52
MDM1-207ENST00000536997 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
MDM1-207ENST00000536997 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
MDM1-207ENST00000536997 APLP2Q06481 763 aa18.18■□□□□ 0.5
MDM1-207ENST00000536997 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
MDM1-207ENST00000536997 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
MDM1-207ENST00000536997 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
MDM1-207ENST00000536997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
MDM1-207ENST00000536997 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
MDM1-207ENST00000536997 SP7Q8TDD2 431 aaPredicted RBP17.85■□□□□ 0.45
MDM1-207ENST00000536997 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
MDM1-207ENST00000536997 POLA2Q14181 598 aa17.58■□□□□ 0.4
MDM1-207ENST00000536997 KCNA4P22459 653 aa17.49■□□□□ 0.39
MDM1-207ENST00000536997 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
MDM1-207ENST00000536997 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
MDM1-207ENST00000536997 HAX1O00165 279 aa17.33■□□□□ 0.36
MDM1-207ENST00000536997 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
MDM1-207ENST00000536997 REM2Q8IYK8 340 aaPredicted RBP17.29■□□□□ 0.36
MDM1-207ENST00000536997 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
MDM1-207ENST00000536997 FXR2P51116 673 aaKnown RBP eCLIP17.15■□□□□ 0.34
MDM1-207ENST00000536997 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
MDM1-207ENST00000536997 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
MDM1-207ENST00000536997 EVX2Q03828 476 aa17.04■□□□□ 0.32
MDM1-207ENST00000536997 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
MDM1-207ENST00000536997 LHX8Q68G74 356 aa16.72■□□□□ 0.27
MDM1-207ENST00000536997 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
MDM1-207ENST00000536997 C19orf67A6NJJ6 358 aa16.64■□□□□ 0.25
MDM1-207ENST00000536997 GABBR2O75899 941 aa16.61■□□□□ 0.25
MDM1-207ENST00000536997 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
MDM1-207ENST00000536997 SPDYE2BA6NHP3 402 aa16.57■□□□□ 0.24
MDM1-207ENST00000536997 SPDYE6P0CI01 402 aa16.57■□□□□ 0.24
MDM1-207ENST00000536997 SPDYE2Q495Y8 402 aa16.57■□□□□ 0.24
MDM1-207ENST00000536997 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
MDM1-207ENST00000536997 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
MDM1-207ENST00000536997 PLSCR2Q9NRY7 297 aa16.41■□□□□ 0.22
MDM1-207ENST00000536997 FBLN2P98095 1184 aa16.36■□□□□ 0.21
MDM1-207ENST00000536997 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
MDM1-207ENST00000536997 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
MDM1-207ENST00000536997 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
MDM1-207ENST00000536997 SSUH2Q9Y2M2 353 aa16.24■□□□□ 0.19
MDM1-207ENST00000536997 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
MDM1-207ENST00000536997 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
MDM1-207ENST00000536997 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
MDM1-207ENST00000536997 PRR29P0C7W0 189 aa16.1■□□□□ 0.17
MDM1-207ENST00000536997 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
MDM1-207ENST00000536997 ZBTB22O15209 634 aa16.07■□□□□ 0.16
MDM1-207ENST00000536997 CLCN6P51797 869 aa16.06■□□□□ 0.16
MDM1-207ENST00000536997 DCBLD2Q96PD2 775 aa15.98■□□□□ 0.15
MDM1-207ENST00000536997 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
MDM1-207ENST00000536997 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
MDM1-207ENST00000536997 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
MDM1-207ENST00000536997 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
MDM1-207ENST00000536997 POTEMA6NI47 508 aa15.8■□□□□ 0.12
MDM1-207ENST00000536997 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
MDM1-207ENST00000536997 ZRANB1Q9UGI0 708 aa15.72■□□□□ 0.11
MDM1-207ENST00000536997 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
MDM1-207ENST00000536997 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
MDM1-207ENST00000536997 PCDH10Q9P2E7 1040 aa15.59■□□□□ 0.09
MDM1-207ENST00000536997 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
MDM1-207ENST00000536997 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
MDM1-207ENST00000536997 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
MDM1-207ENST00000536997 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
MDM1-207ENST00000536997 METRNQ9UJH8 293 aa15.35■□□□□ 0.05
MDM1-207ENST00000536997 POTEJP0CG39 1038 aa15.32■□□□□ 0.04
MDM1-207ENST00000536997 LCE2DQ5TA82 110 aaPredicted RBP15.32■□□□□ 0.04
MDM1-207ENST00000536997 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
MDM1-207ENST00000536997 MAMSTRQ6ZN01 415 aa15.3■□□□□ 0.04
MDM1-207ENST00000536997 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
MDM1-207ENST00000536997 C7P10643 843 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms