RNA–Protein interactions for RNA: ENST00000536975.5

C12orf56-203, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-203ENST00000536975 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
C12orf56-203ENST00000536975 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
C12orf56-203ENST00000536975 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
C12orf56-203ENST00000536975 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
C12orf56-203ENST00000536975 POTEDQ86YR6 584 aa21.29■■□□□ 1
C12orf56-203ENST00000536975 FOXD1Q16676 465 aa20.59■□□□□ 0.89
C12orf56-203ENST00000536975 MSH5O43196 834 aa19.89■□□□□ 0.77
C12orf56-203ENST00000536975 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
C12orf56-203ENST00000536975 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
C12orf56-203ENST00000536975 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
C12orf56-203ENST00000536975 ADRA2BP18089 450 aa18.19■□□□□ 0.5
C12orf56-203ENST00000536975 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
C12orf56-203ENST00000536975 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
C12orf56-203ENST00000536975 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
C12orf56-203ENST00000536975 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
C12orf56-203ENST00000536975 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
C12orf56-203ENST00000536975 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
C12orf56-203ENST00000536975 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
C12orf56-203ENST00000536975 POTEHQ6S545 545 aa16.5■□□□□ 0.23
C12orf56-203ENST00000536975 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
C12orf56-203ENST00000536975 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
C12orf56-203ENST00000536975 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
C12orf56-203ENST00000536975 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
C12orf56-203ENST00000536975 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
C12orf56-203ENST00000536975 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
C12orf56-203ENST00000536975 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
C12orf56-203ENST00000536975 KCNA4P22459 653 aa15.52■□□□□ 0.08
C12orf56-203ENST00000536975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
C12orf56-203ENST00000536975 DSG3P32926 999 aa15.28■□□□□ 0.04
C12orf56-203ENST00000536975 CAPN15O75808 1086 aa15.18■□□□□ 0.02
C12orf56-203ENST00000536975 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
C12orf56-203ENST00000536975 SP7Q8TDD2 431 aaPredicted RBP14.92□□□□□ -0.02
C12orf56-203ENST00000536975 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
C12orf56-203ENST00000536975 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
C12orf56-203ENST00000536975 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
C12orf56-203ENST00000536975 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
C12orf56-203ENST00000536975 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
C12orf56-203ENST00000536975 ABCB7O75027 752 aa14.66□□□□□ -0.06
C12orf56-203ENST00000536975 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
C12orf56-203ENST00000536975 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
C12orf56-203ENST00000536975 APLP2Q06481 763 aa14.61□□□□□ -0.07
C12orf56-203ENST00000536975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
C12orf56-203ENST00000536975 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
C12orf56-203ENST00000536975 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
C12orf56-203ENST00000536975 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
C12orf56-203ENST00000536975 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
C12orf56-203ENST00000536975 HAX1O00165 279 aa14.32□□□□□ -0.12
C12orf56-203ENST00000536975 ZBTB22O15209 634 aa14.28□□□□□ -0.12
C12orf56-203ENST00000536975 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
C12orf56-203ENST00000536975 PLSCR2Q9NRY7 297 aa14.15□□□□□ -0.14
C12orf56-203ENST00000536975 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
C12orf56-203ENST00000536975 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
C12orf56-203ENST00000536975 LHX8Q68G74 356 aa13.99□□□□□ -0.17
C12orf56-203ENST00000536975 POLA2Q14181 598 aa13.97□□□□□ -0.17
C12orf56-203ENST00000536975 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
C12orf56-203ENST00000536975 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
C12orf56-203ENST00000536975 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
C12orf56-203ENST00000536975 EVX2Q03828 476 aa13.86□□□□□ -0.19
C12orf56-203ENST00000536975 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
C12orf56-203ENST00000536975 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
C12orf56-203ENST00000536975 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
C12orf56-203ENST00000536975 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
C12orf56-203ENST00000536975 GABBR2O75899 941 aa13.59□□□□□ -0.23
C12orf56-203ENST00000536975 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
C12orf56-203ENST00000536975 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
C12orf56-203ENST00000536975 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
C12orf56-203ENST00000536975 FBLN2P98095 1184 aa13.45□□□□□ -0.26
C12orf56-203ENST00000536975 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
C12orf56-203ENST00000536975 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
C12orf56-203ENST00000536975 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
C12orf56-203ENST00000536975 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
C12orf56-203ENST00000536975 POTEMA6NI47 508 aa13.24□□□□□ -0.29
C12orf56-203ENST00000536975 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
C12orf56-203ENST00000536975 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
C12orf56-203ENST00000536975 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
C12orf56-203ENST00000536975 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
C12orf56-203ENST00000536975 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
C12orf56-203ENST00000536975 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
C12orf56-203ENST00000536975 CLCN6P51797 869 aa13.13□□□□□ -0.31
C12orf56-203ENST00000536975 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
C12orf56-203ENST00000536975 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
C12orf56-203ENST00000536975 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
C12orf56-203ENST00000536975 OTUD5Q96G74 571 aa13□□□□□ -0.33
C12orf56-203ENST00000536975 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
C12orf56-203ENST00000536975 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
C12orf56-203ENST00000536975 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
C12orf56-203ENST00000536975 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
C12orf56-203ENST00000536975 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
C12orf56-203ENST00000536975 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
C12orf56-203ENST00000536975 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
C12orf56-203ENST00000536975 STAG3Q9UJ98 1225 aa12.64□□□□□ -0.39
C12orf56-203ENST00000536975 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
C12orf56-203ENST00000536975 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
C12orf56-203ENST00000536975 PROM2Q8N271 834 aa12.58□□□□□ -0.4
C12orf56-203ENST00000536975 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.4
C12orf56-203ENST00000536975 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
C12orf56-203ENST00000536975 FKBP8Q14318 412 aa12.56□□□□□ -0.4
C12orf56-203ENST00000536975 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
C12orf56-203ENST00000536975 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
C12orf56-203ENST00000536975 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms