RNA–Protein interactions for RNA: ENST00000536342.1

LINC02393-201, Transcript of long intergenic non-protein coding RNA 2393, humanhuman

TSL 5

Gene LINC02393, Length 406 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02393-201ENST00000536342 AEBP2Q6ZN18 517 aaPredicted RBP17.9■□□□□ 0.46
LINC02393-201ENST00000536342 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
LINC02393-201ENST00000536342 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
LINC02393-201ENST00000536342 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
LINC02393-201ENST00000536342 FOXD1Q16676 465 aa14.2□□□□□ -0.14
LINC02393-201ENST00000536342 PLPPR3Q6T4P5 718 aa14.11□□□□□ -0.15
LINC02393-201ENST00000536342 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
LINC02393-201ENST00000536342 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
LINC02393-201ENST00000536342 ADRA2BP18089 450 aa13.3□□□□□ -0.28
LINC02393-201ENST00000536342 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
LINC02393-201ENST00000536342 MSH5O43196 834 aa13.27□□□□□ -0.29
LINC02393-201ENST00000536342 KCNA4P22459 653 aa12.53□□□□□ -0.4
LINC02393-201ENST00000536342 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
LINC02393-201ENST00000536342 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
LINC02393-201ENST00000536342 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
LINC02393-201ENST00000536342 MAPK8IP2Q13387 824 aaPredicted RBP12.18□□□□□ -0.46
LINC02393-201ENST00000536342 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
LINC02393-201ENST00000536342 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
LINC02393-201ENST00000536342 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
LINC02393-201ENST00000536342 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
LINC02393-201ENST00000536342 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
LINC02393-201ENST00000536342 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
LINC02393-201ENST00000536342 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
LINC02393-201ENST00000536342 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
LINC02393-201ENST00000536342 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
LINC02393-201ENST00000536342 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
LINC02393-201ENST00000536342 ZBTB22O15209 634 aa11.53□□□□□ -0.56
LINC02393-201ENST00000536342 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
LINC02393-201ENST00000536342 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
LINC02393-201ENST00000536342 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
LINC02393-201ENST00000536342 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
LINC02393-201ENST00000536342 C1QBPQ07021 282 aaKnown RBP11.18□□□□□ -0.62
LINC02393-201ENST00000536342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC02393-201ENST00000536342 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
LINC02393-201ENST00000536342 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
LINC02393-201ENST00000536342 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
LINC02393-201ENST00000536342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
LINC02393-201ENST00000536342 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
LINC02393-201ENST00000536342 SAMD1Q6SPF0 538 aaPredicted RBP10.87□□□□□ -0.67
LINC02393-201ENST00000536342 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
LINC02393-201ENST00000536342 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
LINC02393-201ENST00000536342 APLP2Q06481 763 aa10.71□□□□□ -0.69
LINC02393-201ENST00000536342 CAPN15O75808 1086 aa10.7□□□□□ -0.7
LINC02393-201ENST00000536342 DSG3P32926 999 aa10.64□□□□□ -0.71
LINC02393-201ENST00000536342 FKBP8Q14318 412 aa10.61□□□□□ -0.71
LINC02393-201ENST00000536342 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
LINC02393-201ENST00000536342 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
LINC02393-201ENST00000536342 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
LINC02393-201ENST00000536342 TRHP20396 242 aaPredicted RBP10.54□□□□□ -0.72
LINC02393-201ENST00000536342 SLC24A1O60721 1099 aa10.47□□□□□ -0.73
LINC02393-201ENST00000536342 ABCB7O75027 752 aa10.45□□□□□ -0.74
LINC02393-201ENST00000536342 POLA2Q14181 598 aa10.41□□□□□ -0.74
LINC02393-201ENST00000536342 FBLN2P98095 1184 aa10.35□□□□□ -0.75
LINC02393-201ENST00000536342 POTEHQ6S545 545 aa10.35□□□□□ -0.75
LINC02393-201ENST00000536342 MKRN4PQ13434 485 aaPredicted RBP10.34□□□□□ -0.75
LINC02393-201ENST00000536342 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
LINC02393-201ENST00000536342 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
LINC02393-201ENST00000536342 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
LINC02393-201ENST00000536342 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
LINC02393-201ENST00000536342 PROM2Q8N271 834 aa10.12□□□□□ -0.79
LINC02393-201ENST00000536342 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
LINC02393-201ENST00000536342 OSCARQ8IYS5 282 aa10.02□□□□□ -0.81
LINC02393-201ENST00000536342 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
LINC02393-201ENST00000536342 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
LINC02393-201ENST00000536342 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
LINC02393-201ENST00000536342 VASPP50552 380 aaPredicted RBP9.98□□□□□ -0.81
LINC02393-201ENST00000536342 AKT1S1Q96B36 256 aa9.95□□□□□ -0.82
LINC02393-201ENST00000536342 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
LINC02393-201ENST00000536342 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC02393-201ENST00000536342 IFNLR1Q8IU57 520 aaPredicted RBP9.88□□□□□ -0.83
LINC02393-201ENST00000536342 CHRDL2Q6WN34 429 aa9.87□□□□□ -0.83
LINC02393-201ENST00000536342 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
LINC02393-201ENST00000536342 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
LINC02393-201ENST00000536342 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
LINC02393-201ENST00000536342 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
LINC02393-201ENST00000536342 PLCD3Q8N3E9 789 aa9.77□□□□□ -0.85
LINC02393-201ENST00000536342 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
LINC02393-201ENST00000536342 MIER1Q8N108 512 aa9.75□□□□□ -0.85
LINC02393-201ENST00000536342 PITPNM1O00562 1244 aa9.73□□□□□ -0.85
LINC02393-201ENST00000536342 SPOCK2Q92563 424 aa9.71□□□□□ -0.86
LINC02393-201ENST00000536342 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
LINC02393-201ENST00000536342 HAP1P54257 671 aaPredicted RBP9.67□□□□□ -0.86
LINC02393-201ENST00000536342 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
LINC02393-201ENST00000536342 PKD2Q13563 968 aa9.66□□□□□ -0.86
LINC02393-201ENST00000536342 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
LINC02393-201ENST00000536342 ZBTB47Q9UFB7 747 aaPredicted RBP9.63□□□□□ -0.87
LINC02393-201ENST00000536342 SPDYE1Q8NFV5 336 aaPredicted RBP9.62□□□□□ -0.87
LINC02393-201ENST00000536342 CLEC11AQ9Y240 323 aa9.59□□□□□ -0.87
LINC02393-201ENST00000536342 ECM2O94769 699 aaPredicted RBP9.56□□□□□ -0.88
LINC02393-201ENST00000536342 PRR29P0C7W0 189 aa9.55□□□□□ -0.88
LINC02393-201ENST00000536342 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
LINC02393-201ENST00000536342 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
LINC02393-201ENST00000536342 VSIG10Q8N0Z9 540 aa9.51□□□□□ -0.89
LINC02393-201ENST00000536342 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
LINC02393-201ENST00000536342 BCANQ96GW7 911 aa9.48□□□□□ -0.89
LINC02393-201ENST00000536342 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
LINC02393-201ENST00000536342 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
LINC02393-201ENST00000536342 RGL2O15211 777 aa9.45□□□□□ -0.9
LINC02393-201ENST00000536342 SP7Q8TDD2 431 aaPredicted RBP9.45□□□□□ -0.9
LINC02393-201ENST00000536342 HAX1O00165 279 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms