RNA–Protein interactions for RNA: ENST00000529906.5

MS4A6A-211, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3

Gene MS4A6A, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-211ENST00000529906 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
MS4A6A-211ENST00000529906 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
MS4A6A-211ENST00000529906 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
MS4A6A-211ENST00000529906 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
MS4A6A-211ENST00000529906 FOXD1Q16676 465 aa17.99■□□□□ 0.47
MS4A6A-211ENST00000529906 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
MS4A6A-211ENST00000529906 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
MS4A6A-211ENST00000529906 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
MS4A6A-211ENST00000529906 ADRA2BP18089 450 aa17.08■□□□□ 0.32
MS4A6A-211ENST00000529906 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
MS4A6A-211ENST00000529906 MSH5O43196 834 aa16.7■□□□□ 0.26
MS4A6A-211ENST00000529906 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
MS4A6A-211ENST00000529906 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
MS4A6A-211ENST00000529906 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
MS4A6A-211ENST00000529906 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
MS4A6A-211ENST00000529906 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
MS4A6A-211ENST00000529906 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
MS4A6A-211ENST00000529906 KCNA4P22459 653 aa15.13■□□□□ 0.01
MS4A6A-211ENST00000529906 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
MS4A6A-211ENST00000529906 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
MS4A6A-211ENST00000529906 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
MS4A6A-211ENST00000529906 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
MS4A6A-211ENST00000529906 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
MS4A6A-211ENST00000529906 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
MS4A6A-211ENST00000529906 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
MS4A6A-211ENST00000529906 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
MS4A6A-211ENST00000529906 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
MS4A6A-211ENST00000529906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
MS4A6A-211ENST00000529906 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
MS4A6A-211ENST00000529906 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
MS4A6A-211ENST00000529906 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
MS4A6A-211ENST00000529906 ZBTB22O15209 634 aa13.94□□□□□ -0.18
MS4A6A-211ENST00000529906 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
MS4A6A-211ENST00000529906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
MS4A6A-211ENST00000529906 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
MS4A6A-211ENST00000529906 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
MS4A6A-211ENST00000529906 APLP2Q06481 763 aa13.77□□□□□ -0.21
MS4A6A-211ENST00000529906 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
MS4A6A-211ENST00000529906 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
MS4A6A-211ENST00000529906 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
MS4A6A-211ENST00000529906 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
MS4A6A-211ENST00000529906 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
MS4A6A-211ENST00000529906 CAPN15O75808 1086 aa13.59□□□□□ -0.23
MS4A6A-211ENST00000529906 DSG3P32926 999 aa13.52□□□□□ -0.25
MS4A6A-211ENST00000529906 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
MS4A6A-211ENST00000529906 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
MS4A6A-211ENST00000529906 POTEHQ6S545 545 aa13.4□□□□□ -0.26
MS4A6A-211ENST00000529906 ABCB7O75027 752 aa13.29□□□□□ -0.28
MS4A6A-211ENST00000529906 POLA2Q14181 598 aa13.27□□□□□ -0.29
MS4A6A-211ENST00000529906 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
MS4A6A-211ENST00000529906 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
MS4A6A-211ENST00000529906 FBLN2P98095 1184 aa12.94□□□□□ -0.34
MS4A6A-211ENST00000529906 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
MS4A6A-211ENST00000529906 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
MS4A6A-211ENST00000529906 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
MS4A6A-211ENST00000529906 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
MS4A6A-211ENST00000529906 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
MS4A6A-211ENST00000529906 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
MS4A6A-211ENST00000529906 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
MS4A6A-211ENST00000529906 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
MS4A6A-211ENST00000529906 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
MS4A6A-211ENST00000529906 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
MS4A6A-211ENST00000529906 PROM2Q8N271 834 aa12.47□□□□□ -0.41
MS4A6A-211ENST00000529906 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
MS4A6A-211ENST00000529906 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
MS4A6A-211ENST00000529906 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
MS4A6A-211ENST00000529906 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
MS4A6A-211ENST00000529906 FKBP8Q14318 412 aa12.34□□□□□ -0.43
MS4A6A-211ENST00000529906 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
MS4A6A-211ENST00000529906 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
MS4A6A-211ENST00000529906 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
MS4A6A-211ENST00000529906 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
MS4A6A-211ENST00000529906 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
MS4A6A-211ENST00000529906 SP7Q8TDD2 431 aaPredicted RBP12.07□□□□□ -0.48
MS4A6A-211ENST00000529906 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
MS4A6A-211ENST00000529906 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
MS4A6A-211ENST00000529906 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
MS4A6A-211ENST00000529906 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
MS4A6A-211ENST00000529906 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
MS4A6A-211ENST00000529906 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
MS4A6A-211ENST00000529906 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
MS4A6A-211ENST00000529906 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
MS4A6A-211ENST00000529906 MIER1Q8N108 512 aa11.84□□□□□ -0.51
MS4A6A-211ENST00000529906 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
MS4A6A-211ENST00000529906 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
MS4A6A-211ENST00000529906 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
MS4A6A-211ENST00000529906 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
MS4A6A-211ENST00000529906 HAX1O00165 279 aa11.76□□□□□ -0.53
MS4A6A-211ENST00000529906 EVX2Q03828 476 aa11.71□□□□□ -0.53
MS4A6A-211ENST00000529906 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
MS4A6A-211ENST00000529906 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
MS4A6A-211ENST00000529906 NUBP1P53384 320 aa11.67□□□□□ -0.54
MS4A6A-211ENST00000529906 CLCN6P51797 869 aa11.63□□□□□ -0.55
MS4A6A-211ENST00000529906 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
MS4A6A-211ENST00000529906 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
MS4A6A-211ENST00000529906 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
MS4A6A-211ENST00000529906 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
MS4A6A-211ENST00000529906 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
MS4A6A-211ENST00000529906 CCDC61Q9Y6R9 512 aa11.57□□□□□ -0.56
MS4A6A-211ENST00000529906 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms