RNA–Protein interactions for RNA: ENST00000527625.5

CASP1-207, Transcript of caspase 1, humanhuman

TSL 3

Gene CASP1, Length 424 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-207ENST00000527625 AEBP2Q6ZN18 517 aaPredicted RBP31.23■■■□□ 2.59
CASP1-207ENST00000527625 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
CASP1-207ENST00000527625 PHF23Q9BUL5 403 aaPredicted RBP26.71■■□□□ 1.87
CASP1-207ENST00000527625 SENP3Q9H4L4 574 aaPredicted RBP26.52■■□□□ 1.84
CASP1-207ENST00000527625 FOXD1Q16676 465 aa24.64■■□□□ 1.54
CASP1-207ENST00000527625 PLPPR3Q6T4P5 718 aa24.61■■□□□ 1.53
CASP1-207ENST00000527625 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
CASP1-207ENST00000527625 ADRA2BP18089 450 aa23.57■■□□□ 1.36
CASP1-207ENST00000527625 PIAS4Q8N2W9 510 aaPredicted RBP23.16■■□□□ 1.3
CASP1-207ENST00000527625 MSH5O43196 834 aa22.77■■□□□ 1.24
CASP1-207ENST00000527625 PPP4R3CPQ6ZMV5 832 aa21.67■■□□□ 1.06
CASP1-207ENST00000527625 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
CASP1-207ENST00000527625 MAPK8IP2Q13387 824 aaPredicted RBP21.44■■□□□ 1.02
CASP1-207ENST00000527625 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
CASP1-207ENST00000527625 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
CASP1-207ENST00000527625 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
CASP1-207ENST00000527625 KCNA4P22459 653 aa20.99■□□□□ 0.95
CASP1-207ENST00000527625 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
CASP1-207ENST00000527625 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
CASP1-207ENST00000527625 RNF216Q9NWF9 866 aaPredicted RBP20.72■□□□□ 0.91
CASP1-207ENST00000527625 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
CASP1-207ENST00000527625 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
CASP1-207ENST00000527625 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
CASP1-207ENST00000527625 SLC4A1APQ9BWU0 796 aaKnown RBP19.95■□□□□ 0.78
CASP1-207ENST00000527625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
CASP1-207ENST00000527625 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
CASP1-207ENST00000527625 RNF39Q9H2S5 420 aa19.5■□□□□ 0.71
CASP1-207ENST00000527625 FOXD4L1Q9NU39 408 aa19.36■□□□□ 0.69
CASP1-207ENST00000527625 U3KPZ7 1027 aaPredicted RBP19.34■□□□□ 0.69
CASP1-207ENST00000527625 ZBTB22O15209 634 aa19.3■□□□□ 0.68
CASP1-207ENST00000527625 C1QBPQ07021 282 aaKnown RBP19.28■□□□□ 0.68
CASP1-207ENST00000527625 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
CASP1-207ENST00000527625 MYCNP04198 464 aaPredicted RBP19.16■□□□□ 0.66
CASP1-207ENST00000527625 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
CASP1-207ENST00000527625 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.64
CASP1-207ENST00000527625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
CASP1-207ENST00000527625 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
CASP1-207ENST00000527625 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
CASP1-207ENST00000527625 APLP2Q06481 763 aa18.89■□□□□ 0.61
CASP1-207ENST00000527625 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
CASP1-207ENST00000527625 CAPN15O75808 1086 aa18.76■□□□□ 0.59
CASP1-207ENST00000527625 ATXN8OSP0DMR3 200 aa18.74■□□□□ 0.59
CASP1-207ENST00000527625 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
CASP1-207ENST00000527625 ZNF219Q9P2Y4 722 aaPredicted RBP18.65■□□□□ 0.58
CASP1-207ENST00000527625 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
CASP1-207ENST00000527625 DSG3P32926 999 aa18.52■□□□□ 0.56
CASP1-207ENST00000527625 ABCB7O75027 752 aa18.37■□□□□ 0.53
CASP1-207ENST00000527625 POLA2Q14181 598 aa18.34■□□□□ 0.53
CASP1-207ENST00000527625 ZBTB12Q9Y330 459 aaPredicted RBP18.01■□□□□ 0.47
CASP1-207ENST00000527625 FBLN2P98095 1184 aa17.88■□□□□ 0.45
CASP1-207ENST00000527625 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
CASP1-207ENST00000527625 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
CASP1-207ENST00000527625 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
CASP1-207ENST00000527625 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
CASP1-207ENST00000527625 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
CASP1-207ENST00000527625 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
CASP1-207ENST00000527625 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
CASP1-207ENST00000527625 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
CASP1-207ENST00000527625 SPDYE4A6NLX3 237 aa17.38■□□□□ 0.37
CASP1-207ENST00000527625 SSUH2Q9Y2M2 353 aa17.37■□□□□ 0.37
CASP1-207ENST00000527625 FKBP8Q14318 412 aa17.25■□□□□ 0.35
CASP1-207ENST00000527625 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
CASP1-207ENST00000527625 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
CASP1-207ENST00000527625 PROM2Q8N271 834 aa17.1■□□□□ 0.33
CASP1-207ENST00000527625 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
CASP1-207ENST00000527625 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
CASP1-207ENST00000527625 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
CASP1-207ENST00000527625 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
CASP1-207ENST00000527625 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
CASP1-207ENST00000527625 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
CASP1-207ENST00000527625 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.27
CASP1-207ENST00000527625 PIP4P2Q8N4L2 257 aa16.71■□□□□ 0.27
CASP1-207ENST00000527625 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
CASP1-207ENST00000527625 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
CASP1-207ENST00000527625 POTEHQ6S545 545 aa16.58■□□□□ 0.24
CASP1-207ENST00000527625 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
CASP1-207ENST00000527625 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
CASP1-207ENST00000527625 MIER1Q8N108 512 aa16.51■□□□□ 0.23
CASP1-207ENST00000527625 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
CASP1-207ENST00000527625 PLCD3Q8N3E9 789 aa16.44■□□□□ 0.22
CASP1-207ENST00000527625 PLEKHG5O94827 1062 aa16.42■□□□□ 0.22
CASP1-207ENST00000527625 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
CASP1-207ENST00000527625 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
CASP1-207ENST00000527625 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
CASP1-207ENST00000527625 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
CASP1-207ENST00000527625 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
CASP1-207ENST00000527625 HAX1O00165 279 aa16.21■□□□□ 0.19
CASP1-207ENST00000527625 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
CASP1-207ENST00000527625 C19orf67A6NJJ6 358 aa16.18■□□□□ 0.18
CASP1-207ENST00000527625 NUBP1P53384 320 aa16.11■□□□□ 0.17
CASP1-207ENST00000527625 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
CASP1-207ENST00000527625 EVX2Q03828 476 aa16.08■□□□□ 0.16
CASP1-207ENST00000527625 SPOCK2Q92563 424 aa16.06■□□□□ 0.16
CASP1-207ENST00000527625 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
CASP1-207ENST00000527625 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
CASP1-207ENST00000527625 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
CASP1-207ENST00000527625 TSPYL2Q9H2G4 693 aaPredicted RBP15.99■□□□□ 0.15
CASP1-207ENST00000527625 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
CASP1-207ENST00000527625 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
CASP1-207ENST00000527625 ZNF579Q8NAF0 562 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 630.4 ms