RNA–Protein interactions for RNA: ENST00000527492.5

LINC02546-201, Transcript of long intergenic non-protein coding RNA 2546, humanhuman

TSL 3

Gene LINC02546, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02546-201ENST00000527492 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
LINC02546-201ENST00000527492 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
LINC02546-201ENST00000527492 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
LINC02546-201ENST00000527492 PHF23Q9BUL5 403 aaPredicted RBP13.53□□□□□ -0.24
LINC02546-201ENST00000527492 FOXD1Q16676 465 aa12.87□□□□□ -0.35
LINC02546-201ENST00000527492 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
LINC02546-201ENST00000527492 MSH5O43196 834 aa12.2□□□□□ -0.46
LINC02546-201ENST00000527492 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
LINC02546-201ENST00000527492 PPP6R1Q9UPN7 881 aa11.75□□□□□ -0.53
LINC02546-201ENST00000527492 PLPPR3Q6T4P5 718 aa11.74□□□□□ -0.53
LINC02546-201ENST00000527492 ADRA2BP18089 450 aa11.68□□□□□ -0.54
LINC02546-201ENST00000527492 DMRT2Q9Y5R5 561 aa10.88□□□□□ -0.67
LINC02546-201ENST00000527492 MAPK8IP2Q13387 824 aaPredicted RBP10.84□□□□□ -0.67
LINC02546-201ENST00000527492 SCAF1Q9H7N4 1312 aaKnown RBP10.7□□□□□ -0.7
LINC02546-201ENST00000527492 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
LINC02546-201ENST00000527492 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
LINC02546-201ENST00000527492 DCAF8L1A6NGE4 600 aa10.36□□□□□ -0.75
LINC02546-201ENST00000527492 HOXD11P31277 338 aaPredicted RBP10.35□□□□□ -0.75
LINC02546-201ENST00000527492 PPP4R3CPQ6ZMV5 832 aa10.24□□□□□ -0.77
LINC02546-201ENST00000527492 C1QBPQ07021 282 aaKnown RBP10.21□□□□□ -0.77
LINC02546-201ENST00000527492 RNF216Q9NWF9 866 aaPredicted RBP10.16□□□□□ -0.78
LINC02546-201ENST00000527492 CNKSR2Q8WXI2 1034 aa10.15□□□□□ -0.78
LINC02546-201ENST00000527492 DNAJC5BQ9UF47 199 aa10.1□□□□□ -0.79
LINC02546-201ENST00000527492 KCNA4P22459 653 aa10.07□□□□□ -0.8
LINC02546-201ENST00000527492 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
LINC02546-201ENST00000527492 NPM3O75607 178 aaKnown RBP9.81□□□□□ -0.84
LINC02546-201ENST00000527492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC02546-201ENST00000527492 POTEHQ6S545 545 aa9.73□□□□□ -0.85
LINC02546-201ENST00000527492 SLC4A1APQ9BWU0 796 aaKnown RBP9.63□□□□□ -0.87
LINC02546-201ENST00000527492 DSG3P32926 999 aa9.59□□□□□ -0.87
LINC02546-201ENST00000527492 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
LINC02546-201ENST00000527492 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
LINC02546-201ENST00000527492 CAPN15O75808 1086 aa9.52□□□□□ -0.89
LINC02546-201ENST00000527492 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
LINC02546-201ENST00000527492 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
LINC02546-201ENST00000527492 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
LINC02546-201ENST00000527492 APLP2Q06481 763 aa9.28□□□□□ -0.92
LINC02546-201ENST00000527492 ZNF219Q9P2Y4 722 aaPredicted RBP9.28□□□□□ -0.92
LINC02546-201ENST00000527492 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
LINC02546-201ENST00000527492 FOXD4L1Q9NU39 408 aa9.27□□□□□ -0.93
LINC02546-201ENST00000527492 ABCB7O75027 752 aa9.26□□□□□ -0.93
LINC02546-201ENST00000527492 ZBTB22O15209 634 aa9.24□□□□□ -0.93
LINC02546-201ENST00000527492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.18□□□□□ -0.94
LINC02546-201ENST00000527492 HNRNPUL2Q1KMD3 747 aaKnown RBP9.18□□□□□ -0.94
LINC02546-201ENST00000527492 RBM42Q9BTD8 480 aaKnown RBP9.15□□□□□ -0.94
LINC02546-201ENST00000527492 SAMD1Q6SPF0 538 aaPredicted RBP9.11□□□□□ -0.95
LINC02546-201ENST00000527492 MYCNP04198 464 aaPredicted RBP9.09□□□□□ -0.95
LINC02546-201ENST00000527492 CHRDL2Q6WN34 429 aa9.09□□□□□ -0.95
LINC02546-201ENST00000527492 POLA2Q14181 598 aa8.96□□□□□ -0.98
LINC02546-201ENST00000527492 SP7Q8TDD2 431 aaPredicted RBP8.96□□□□□ -0.98
LINC02546-201ENST00000527492 ATXN8OSP0DMR3 200 aa8.93□□□□□ -0.98
LINC02546-201ENST00000527492 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
LINC02546-201ENST00000527492 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
LINC02546-201ENST00000527492 ATF5Q9Y2D1 282 aaPredicted RBP8.8□□□□□ -1
LINC02546-201ENST00000527492 REM2Q8IYK8 340 aaPredicted RBP8.78□□□□□ -1
LINC02546-201ENST00000527492 ZBTB12Q9Y330 459 aaPredicted RBP8.77□□□□□ -1.01
LINC02546-201ENST00000527492 HAX1O00165 279 aa8.71□□□□□ -1.02
LINC02546-201ENST00000527492 FXR2P51116 673 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC02546-201ENST00000527492 PITPNM1O00562 1244 aa8.69□□□□□ -1.02
LINC02546-201ENST00000527492 OSCARQ8IYS5 282 aa8.68□□□□□ -1.02
LINC02546-201ENST00000527492 EVX2Q03828 476 aa8.6□□□□□ -1.03
LINC02546-201ENST00000527492 SPDYE2BA6NHP3 402 aa8.48□□□□□ -1.05
LINC02546-201ENST00000527492 SPDYE6P0CI01 402 aa8.48□□□□□ -1.05
LINC02546-201ENST00000527492 FBLN2P98095 1184 aa8.48□□□□□ -1.05
LINC02546-201ENST00000527492 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
LINC02546-201ENST00000527492 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
LINC02546-201ENST00000527492 PRKAR2AP13861 404 aaKnown RBP8.45□□□□□ -1.06
LINC02546-201ENST00000527492 FKBP8Q14318 412 aa8.43□□□□□ -1.06
LINC02546-201ENST00000527492 MKRN4PQ13434 485 aaPredicted RBP8.42□□□□□ -1.06
LINC02546-201ENST00000527492 SPDYE1Q8NFV5 336 aaPredicted RBP8.41□□□□□ -1.06
LINC02546-201ENST00000527492 GABBR2O75899 941 aa8.39□□□□□ -1.07
LINC02546-201ENST00000527492 LHX8Q68G74 356 aa8.38□□□□□ -1.07
LINC02546-201ENST00000527492 CLEC11AQ9Y240 323 aa8.37□□□□□ -1.07
LINC02546-201ENST00000527492 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
LINC02546-201ENST00000527492 SPDYE4A6NLX3 237 aa8.32□□□□□ -1.08
LINC02546-201ENST00000527492 ZNF692Q9BU19 519 aaPredicted RBP8.28□□□□□ -1.08
LINC02546-201ENST00000527492 CHADLQ6NUI6 762 aa8.26□□□□□ -1.09
LINC02546-201ENST00000527492 POTEIP0CG38 1075 aa8.22□□□□□ -1.09
LINC02546-201ENST00000527492 PRR29P0C7W0 189 aa8.2□□□□□ -1.1
LINC02546-201ENST00000527492 CLCN6P51797 869 aa8.17□□□□□ -1.1
LINC02546-201ENST00000527492 CD44P16070 742 aaKnown RBP8.16□□□□□ -1.1
LINC02546-201ENST00000527492 PABPN1Q86U42 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC02546-201ENST00000527492 PROM2Q8N271 834 aa8.15□□□□□ -1.1
LINC02546-201ENST00000527492 FARP1Q9Y4F1 1045 aaPredicted RBP8.13□□□□□ -1.11
LINC02546-201ENST00000527492 FBXO3Q9UK99 471 aa8.12□□□□□ -1.11
LINC02546-201ENST00000527492 PLSCR2Q9NRY7 297 aa8.1□□□□□ -1.11
LINC02546-201ENST00000527492 DCBLD2Q96PD2 775 aa8.06□□□□□ -1.12
LINC02546-201ENST00000527492 ZNF579Q8NAF0 562 aaKnown RBP8.05□□□□□ -1.12
LINC02546-201ENST00000527492 STAG3Q9UJ98 1225 aa8.02□□□□□ -1.13
LINC02546-201ENST00000527492 OTUD5Q96G74 571 aa7.98□□□□□ -1.13
LINC02546-201ENST00000527492 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
LINC02546-201ENST00000527492 VASPP50552 380 aaPredicted RBP7.97□□□□□ -1.13
LINC02546-201ENST00000527492 GALR2O43603 387 aaPredicted RBP7.94□□□□□ -1.14
LINC02546-201ENST00000527492 CREBZFQ9NS37 354 aa7.94□□□□□ -1.14
LINC02546-201ENST00000527492 POTEB2H3BUK9 544 aa7.93□□□□□ -1.14
LINC02546-201ENST00000527492 POTEMA6NI47 508 aa7.9□□□□□ -1.14
LINC02546-201ENST00000527492 MIER1Q8N108 512 aa7.9□□□□□ -1.14
LINC02546-201ENST00000527492 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
LINC02546-201ENST00000527492 PLEKHG5O94827 1062 aa7.88□□□□□ -1.15
LINC02546-201ENST00000527492 POTEGQ6S5H5 508 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms