RNA–Protein interactions for RNA: ENST00000526876.2

CKAP5-206, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5

Gene CKAP5, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-206ENST00000526876 AEBP2Q6ZN18 517 aaPredicted RBP31.35■■■□□ 2.61
CKAP5-206ENST00000526876 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
CKAP5-206ENST00000526876 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
CKAP5-206ENST00000526876 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
CKAP5-206ENST00000526876 FOXD1Q16676 465 aa24.76■■□□□ 1.55
CKAP5-206ENST00000526876 PLPPR3Q6T4P5 718 aa24.59■■□□□ 1.53
CKAP5-206ENST00000526876 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
CKAP5-206ENST00000526876 ADRA2BP18089 450 aa23.54■■□□□ 1.36
CKAP5-206ENST00000526876 PIAS4Q8N2W9 510 aaPredicted RBP23.26■■□□□ 1.31
CKAP5-206ENST00000526876 MSH5O43196 834 aa22.99■■□□□ 1.27
CKAP5-206ENST00000526876 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
CKAP5-206ENST00000526876 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
CKAP5-206ENST00000526876 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
CKAP5-206ENST00000526876 POTEDQ86YR6 584 aa21.32■■□□□ 1
CKAP5-206ENST00000526876 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
CKAP5-206ENST00000526876 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
CKAP5-206ENST00000526876 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
CKAP5-206ENST00000526876 KCNA4P22459 653 aa20.78■□□□□ 0.92
CKAP5-206ENST00000526876 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
CKAP5-206ENST00000526876 RNF216Q9NWF9 866 aaPredicted RBP20.76■□□□□ 0.91
CKAP5-206ENST00000526876 NPM3O75607 178 aaKnown RBP20.66■□□□□ 0.9
CKAP5-206ENST00000526876 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
CKAP5-206ENST00000526876 DCAF8L1A6NGE4 600 aa20.21■□□□□ 0.83
CKAP5-206ENST00000526876 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
CKAP5-206ENST00000526876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.744e-9■□□□□ 9.6
CKAP5-206ENST00000526876 RNF39Q9H2S5 420 aa19.67■□□□□ 0.74
CKAP5-206ENST00000526876 SLC4A2P04920 1241 aa19.58■□□□□ 0.72
CKAP5-206ENST00000526876 C1QBPQ07021 282 aaKnown RBP19.44■□□□□ 0.7
CKAP5-206ENST00000526876 U3KPZ7 1027 aaPredicted RBP19.37■□□□□ 0.69
CKAP5-206ENST00000526876 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
CKAP5-206ENST00000526876 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
CKAP5-206ENST00000526876 ZBTB22O15209 634 aa19.14■□□□□ 0.65
CKAP5-206ENST00000526876 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
CKAP5-206ENST00000526876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
CKAP5-206ENST00000526876 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
CKAP5-206ENST00000526876 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
CKAP5-206ENST00000526876 APLP2Q06481 763 aa18.95■□□□□ 0.62
CKAP5-206ENST00000526876 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
CKAP5-206ENST00000526876 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
CKAP5-206ENST00000526876 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
CKAP5-206ENST00000526876 CAPN15O75808 1086 aa18.78■□□□□ 0.6
CKAP5-206ENST00000526876 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
CKAP5-206ENST00000526876 ATXN8OSP0DMR3 200 aa18.67■□□□□ 0.58
CKAP5-206ENST00000526876 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
CKAP5-206ENST00000526876 DSG3P32926 999 aa18.6■□□□□ 0.57
CKAP5-206ENST00000526876 ATF5Q9Y2D1 282 aaPredicted RBP18.57■□□□□ 0.56
CKAP5-206ENST00000526876 ABCB7O75027 752 aa18.37■□□□□ 0.53
CKAP5-206ENST00000526876 POLA2Q14181 598 aa18.31■□□□□ 0.52
CKAP5-206ENST00000526876 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
CKAP5-206ENST00000526876 FBLN2P98095 1184 aa17.83■□□□□ 0.44
CKAP5-206ENST00000526876 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
CKAP5-206ENST00000526876 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
CKAP5-206ENST00000526876 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
CKAP5-206ENST00000526876 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
CKAP5-206ENST00000526876 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
CKAP5-206ENST00000526876 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
CKAP5-206ENST00000526876 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
CKAP5-206ENST00000526876 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
CKAP5-206ENST00000526876 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
CKAP5-206ENST00000526876 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
CKAP5-206ENST00000526876 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
CKAP5-206ENST00000526876 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
CKAP5-206ENST00000526876 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
CKAP5-206ENST00000526876 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
CKAP5-206ENST00000526876 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
CKAP5-206ENST00000526876 PROM2Q8N271 834 aa17.04■□□□□ 0.32
CKAP5-206ENST00000526876 FKBP8Q14318 412 aa16.97■□□□□ 0.31
CKAP5-206ENST00000526876 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
CKAP5-206ENST00000526876 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
CKAP5-206ENST00000526876 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.298e-12■■■■■ 30.2
CKAP5-206ENST00000526876 POTEHQ6S545 545 aa16.83■□□□□ 0.28
CKAP5-206ENST00000526876 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
CKAP5-206ENST00000526876 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
CKAP5-206ENST00000526876 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
CKAP5-206ENST00000526876 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
CKAP5-206ENST00000526876 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
CKAP5-206ENST00000526876 CHADLQ6NUI6 762 aa16.52■□□□□ 0.24
CKAP5-206ENST00000526876 FARP1Q9Y4F1 1045 aaPredicted RBP16.42■□□□□ 0.22
CKAP5-206ENST00000526876 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
CKAP5-206ENST00000526876 MIER1Q8N108 512 aa16.35■□□□□ 0.21
CKAP5-206ENST00000526876 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
CKAP5-206ENST00000526876 HAX1O00165 279 aa16.29■□□□□ 0.2
CKAP5-206ENST00000526876 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
CKAP5-206ENST00000526876 C19orf67A6NJJ6 358 aa16.28■□□□□ 0.2
CKAP5-206ENST00000526876 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
CKAP5-206ENST00000526876 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
CKAP5-206ENST00000526876 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
CKAP5-206ENST00000526876 CD44P16070 742 aaKnown RBP16.14■□□□□ 0.17
CKAP5-206ENST00000526876 EVX2Q03828 476 aa16.14■□□□□ 0.17
CKAP5-206ENST00000526876 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
CKAP5-206ENST00000526876 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
CKAP5-206ENST00000526876 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
CKAP5-206ENST00000526876 NUBP1P53384 320 aa16.02■□□□□ 0.16
CKAP5-206ENST00000526876 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
CKAP5-206ENST00000526876 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
CKAP5-206ENST00000526876 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
CKAP5-206ENST00000526876 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
CKAP5-206ENST00000526876 CLCN6P51797 869 aa15.95■□□□□ 0.14
CKAP5-206ENST00000526876 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
CKAP5-206ENST00000526876 SPOCK2Q92563 424 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms