RNA–Protein interactions for RNA: ENST00000526845.1

TRIM3-204, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 658 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-204ENST00000526845 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
TRIM3-204ENST00000526845 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
TRIM3-204ENST00000526845 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
TRIM3-204ENST00000526845 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
TRIM3-204ENST00000526845 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-204ENST00000526845 FOXD1Q16676 465 aa12.79□□□□□ -0.36
TRIM3-204ENST00000526845 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
TRIM3-204ENST00000526845 MSH5O43196 834 aa12.41□□□□□ -0.42
TRIM3-204ENST00000526845 ADRA2BP18089 450 aa12.03□□□□□ -0.48
TRIM3-204ENST00000526845 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
TRIM3-204ENST00000526845 PIAS4Q8N2W9 510 aaPredicted RBP11.79□□□□□ -0.52
TRIM3-204ENST00000526845 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
TRIM3-204ENST00000526845 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
TRIM3-204ENST00000526845 MAPK8IP2Q13387 824 aaPredicted RBP10.92□□□□□ -0.66
TRIM3-204ENST00000526845 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
TRIM3-204ENST00000526845 KCNA4P22459 653 aa10.85□□□□□ -0.67
TRIM3-204ENST00000526845 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
TRIM3-204ENST00000526845 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
TRIM3-204ENST00000526845 DMRT2Q9Y5R5 561 aa10.72□□□□□ -0.69
TRIM3-204ENST00000526845 NPM3O75607 178 aaKnown RBP10.64□□□□□ -0.71
TRIM3-204ENST00000526845 POTEHQ6S545 545 aa10.55□□□□□ -0.72
TRIM3-204ENST00000526845 RNF216Q9NWF9 866 aaPredicted RBP10.51□□□□□ -0.73
TRIM3-204ENST00000526845 RNF39Q9H2S5 420 aa10.5□□□□□ -0.73
TRIM3-204ENST00000526845 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
TRIM3-204ENST00000526845 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
TRIM3-204ENST00000526845 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
TRIM3-204ENST00000526845 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
TRIM3-204ENST00000526845 SLC4A1APQ9BWU0 796 aaKnown RBP10.3□□□□□ -0.76
TRIM3-204ENST00000526845 DNAJC5BQ9UF47 199 aa10.21□□□□□ -0.77
TRIM3-204ENST00000526845 CSRNP3Q8WYN3 585 aa10.06□□□□□ -0.8
TRIM3-204ENST00000526845 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
TRIM3-204ENST00000526845 ZBTB22O15209 634 aa10.01□□□□□ -0.81
TRIM3-204ENST00000526845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRIM3-204ENST00000526845 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
TRIM3-204ENST00000526845 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
TRIM3-204ENST00000526845 MYCNP04198 464 aaPredicted RBP9.8□□□□□ -0.84
TRIM3-204ENST00000526845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.86
TRIM3-204ENST00000526845 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.86
TRIM3-204ENST00000526845 SAMD1Q6SPF0 538 aaPredicted RBP9.65□□□□□ -0.86
TRIM3-204ENST00000526845 SPINK5Q9NQ38 1064 aaPredicted RBP9.62□□□□□ -0.87
TRIM3-204ENST00000526845 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
TRIM3-204ENST00000526845 CAPN15O75808 1086 aa9.56□□□□□ -0.88
TRIM3-204ENST00000526845 APLP2Q06481 763 aa9.55□□□□□ -0.88
TRIM3-204ENST00000526845 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
TRIM3-204ENST00000526845 TRHP20396 242 aaPredicted RBP9.52□□□□□ -0.89
TRIM3-204ENST00000526845 DSG3P32926 999 aa9.47□□□□□ -0.89
TRIM3-204ENST00000526845 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
TRIM3-204ENST00000526845 SP7Q8TDD2 431 aaPredicted RBP9.45□□□□□ -0.9
TRIM3-204ENST00000526845 ABCB7O75027 752 aa9.42□□□□□ -0.9
TRIM3-204ENST00000526845 POLA2Q14181 598 aa9.34□□□□□ -0.91
TRIM3-204ENST00000526845 CHRDL2Q6WN34 429 aa9.25□□□□□ -0.93
TRIM3-204ENST00000526845 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
TRIM3-204ENST00000526845 MKRN4PQ13434 485 aaPredicted RBP9.17□□□□□ -0.94
TRIM3-204ENST00000526845 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
TRIM3-204ENST00000526845 FBLN2P98095 1184 aa9.12□□□□□ -0.95
TRIM3-204ENST00000526845 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
TRIM3-204ENST00000526845 FKBP8Q14318 412 aa9.1□□□□□ -0.95
TRIM3-204ENST00000526845 OSCARQ8IYS5 282 aa9.08□□□□□ -0.96
TRIM3-204ENST00000526845 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
TRIM3-204ENST00000526845 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
TRIM3-204ENST00000526845 PLSCR2Q9NRY7 297 aa9.02□□□□□ -0.97
TRIM3-204ENST00000526845 SPDYE4A6NLX3 237 aa8.93□□□□□ -0.98
TRIM3-204ENST00000526845 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.98
TRIM3-204ENST00000526845 SPDYE6P0CI01 402 aa8.9□□□□□ -0.98
TRIM3-204ENST00000526845 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
TRIM3-204ENST00000526845 ZNF692Q9BU19 519 aaPredicted RBP8.89□□□□□ -0.99
TRIM3-204ENST00000526845 SSUH2Q9Y2M2 353 aa8.87□□□□□ -0.99
TRIM3-204ENST00000526845 HAX1O00165 279 aa8.86□□□□□ -0.99
TRIM3-204ENST00000526845 LHX8Q68G74 356 aa8.81□□□□□ -1
TRIM3-204ENST00000526845 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
TRIM3-204ENST00000526845 PABPN1Q86U42 306 aaKnown RBP eCLIP8.8□□□□□ -1
TRIM3-204ENST00000526845 AKT1S1Q96B36 256 aa8.79□□□□□ -1
TRIM3-204ENST00000526845 PROM2Q8N271 834 aa8.76□□□□□ -1.01
TRIM3-204ENST00000526845 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
TRIM3-204ENST00000526845 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
TRIM3-204ENST00000526845 PITPNM1O00562 1244 aa8.68□□□□□ -1.02
TRIM3-204ENST00000526845 EVX2Q03828 476 aa8.67□□□□□ -1.02
TRIM3-204ENST00000526845 CLEC11AQ9Y240 323 aa8.66□□□□□ -1.02
TRIM3-204ENST00000526845 SPDYE1Q8NFV5 336 aaPredicted RBP8.65□□□□□ -1.02
TRIM3-204ENST00000526845 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM3-204ENST00000526845 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
TRIM3-204ENST00000526845 PRR29P0C7W0 189 aa8.54□□□□□ -1.04
TRIM3-204ENST00000526845 VASPP50552 380 aaPredicted RBP8.54□□□□□ -1.04
TRIM3-204ENST00000526845 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
TRIM3-204ENST00000526845 GABBR2O75899 941 aa8.46□□□□□ -1.06
TRIM3-204ENST00000526845 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
TRIM3-204ENST00000526845 MIER1Q8N108 512 aa8.45□□□□□ -1.06
TRIM3-204ENST00000526845 PLCD3Q8N3E9 789 aa8.45□□□□□ -1.06
TRIM3-204ENST00000526845 PRKAR2AP13861 404 aaKnown RBP8.44□□□□□ -1.06
TRIM3-204ENST00000526845 PLCB2Q00722 1185 aa8.43□□□□□ -1.06
TRIM3-204ENST00000526845 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
TRIM3-204ENST00000526845 C19orf67A6NJJ6 358 aa8.39□□□□□ -1.07
TRIM3-204ENST00000526845 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
TRIM3-204ENST00000526845 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
TRIM3-204ENST00000526845 POTEMA6NI47 508 aa8.36□□□□□ -1.07
TRIM3-204ENST00000526845 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
TRIM3-204ENST00000526845 KLHL34Q8N239 644 aa8.35□□□□□ -1.07
TRIM3-204ENST00000526845 PCDH10Q9P2E7 1040 aa8.35□□□□□ -1.07
TRIM3-204ENST00000526845 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
TRIM3-204ENST00000526845 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms