RNA–Protein interactions for RNA: ENST00000526528.1

LMO7-220, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-220ENST00000526528 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.36
LMO7-220ENST00000526528 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
LMO7-220ENST00000526528 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
LMO7-220ENST00000526528 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
LMO7-220ENST00000526528 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
LMO7-220ENST00000526528 FOXD1Q16676 465 aa13.64□□□□□ -0.23
LMO7-220ENST00000526528 ADRA2BP18089 450 aa13.13□□□□□ -0.31
LMO7-220ENST00000526528 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
LMO7-220ENST00000526528 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
LMO7-220ENST00000526528 MSH5O43196 834 aa12.51□□□□□ -0.41
LMO7-220ENST00000526528 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
LMO7-220ENST00000526528 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
LMO7-220ENST00000526528 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
LMO7-220ENST00000526528 KCNA4P22459 653 aa11.82□□□□□ -0.52
LMO7-220ENST00000526528 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
LMO7-220ENST00000526528 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
LMO7-220ENST00000526528 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
LMO7-220ENST00000526528 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
LMO7-220ENST00000526528 POTEDQ86YR6 584 aa11.48□□□□□ -0.57
LMO7-220ENST00000526528 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
LMO7-220ENST00000526528 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
LMO7-220ENST00000526528 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
LMO7-220ENST00000526528 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
LMO7-220ENST00000526528 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
LMO7-220ENST00000526528 SLC4A2P04920 1241 aa10.96□□□□□ -0.65
LMO7-220ENST00000526528 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
LMO7-220ENST00000526528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.663e-9■■□□□ 11.5
LMO7-220ENST00000526528 ZBTB22O15209 634 aa10.88□□□□□ -0.67
LMO7-220ENST00000526528 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
LMO7-220ENST00000526528 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
LMO7-220ENST00000526528 U3KPZ7 1027 aaPredicted RBP10.77□□□□□ -0.69
LMO7-220ENST00000526528 RNF39Q9H2S5 420 aa10.74□□□□□ -0.69
LMO7-220ENST00000526528 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
LMO7-220ENST00000526528 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
LMO7-220ENST00000526528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
LMO7-220ENST00000526528 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
LMO7-220ENST00000526528 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
LMO7-220ENST00000526528 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
LMO7-220ENST00000526528 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
LMO7-220ENST00000526528 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
LMO7-220ENST00000526528 CAPN15O75808 1086 aa10.43□□□□□ -0.74
LMO7-220ENST00000526528 APLP2Q06481 763 aa10.42□□□□□ -0.74
LMO7-220ENST00000526528 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
LMO7-220ENST00000526528 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
LMO7-220ENST00000526528 ZNF219Q9P2Y4 722 aaPredicted RBP10.32□□□□□ -0.76
LMO7-220ENST00000526528 ABCB7O75027 752 aa10.27□□□□□ -0.77
LMO7-220ENST00000526528 DSG3P32926 999 aa10.24□□□□□ -0.77
LMO7-220ENST00000526528 POLA2Q14181 598 aa10.19□□□□□ -0.78
LMO7-220ENST00000526528 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
LMO7-220ENST00000526528 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
LMO7-220ENST00000526528 FBLN2P98095 1184 aa9.95□□□□□ -0.82
LMO7-220ENST00000526528 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
LMO7-220ENST00000526528 FKBP8Q14318 412 aa9.76□□□□□ -0.85
LMO7-220ENST00000526528 SPDYE4A6NLX3 237 aa9.73□□□□□ -0.85
LMO7-220ENST00000526528 SPDYE2BA6NHP3 402 aa9.72□□□□□ -0.85
LMO7-220ENST00000526528 SPDYE6P0CI01 402 aa9.72□□□□□ -0.85
LMO7-220ENST00000526528 SPDYE2Q495Y8 402 aa9.72□□□□□ -0.85
LMO7-220ENST00000526528 RBM42Q9BTD8 480 aaKnown RBP9.71□□□□□ -0.86
LMO7-220ENST00000526528 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
LMO7-220ENST00000526528 SSUH2Q9Y2M2 353 aa9.66□□□□□ -0.86
LMO7-220ENST00000526528 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
LMO7-220ENST00000526528 PABPN1Q86U42 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
LMO7-220ENST00000526528 PROM2Q8N271 834 aa9.55□□□□□ -0.88
LMO7-220ENST00000526528 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
LMO7-220ENST00000526528 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
LMO7-220ENST00000526528 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
LMO7-220ENST00000526528 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
LMO7-220ENST00000526528 STAG3Q9UJ98 1225 aa9.36□□□□□ -0.91
LMO7-220ENST00000526528 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
LMO7-220ENST00000526528 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
LMO7-220ENST00000526528 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
LMO7-220ENST00000526528 VASPP50552 380 aaPredicted RBP9.27□□□□□ -0.93
LMO7-220ENST00000526528 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
LMO7-220ENST00000526528 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
LMO7-220ENST00000526528 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.93
LMO7-220ENST00000526528 MIER1Q8N108 512 aa9.23□□□□□ -0.93
LMO7-220ENST00000526528 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
LMO7-220ENST00000526528 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
LMO7-220ENST00000526528 PRKAR2AP13861 404 aaKnown RBP9.21□□□□□ -0.94
LMO7-220ENST00000526528 IFNLR1Q8IU57 520 aaPredicted RBP9.15□□□□□ -0.94
LMO7-220ENST00000526528 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
LMO7-220ENST00000526528 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
LMO7-220ENST00000526528 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
LMO7-220ENST00000526528 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
LMO7-220ENST00000526528 POTEHQ6S545 545 aa9.08□□□□□ -0.96
LMO7-220ENST00000526528 ZBTB47Q9UFB7 747 aaPredicted RBP9.05□□□□□ -0.96
LMO7-220ENST00000526528 NPM1P06748 294 aaKnown RBP eCLIP9.02□□□□□ -0.97
LMO7-220ENST00000526528 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
LMO7-220ENST00000526528 NUBP1P53384 320 aa9□□□□□ -0.97
LMO7-220ENST00000526528 RASEFQ8IZ41 740 aa8.99□□□□□ -0.97
LMO7-220ENST00000526528 HAX1O00165 279 aa8.95□□□□□ -0.98
LMO7-220ENST00000526528 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
LMO7-220ENST00000526528 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
LMO7-220ENST00000526528 C19orf67A6NJJ6 358 aa8.93□□□□□ -0.98
LMO7-220ENST00000526528 EVX2Q03828 476 aa8.91□□□□□ -0.98
LMO7-220ENST00000526528 DCAF8Q5TAQ9 597 aa8.91□□□□□ -0.98
LMO7-220ENST00000526528 FAM212AQ96EL1 285 aa8.91□□□□□ -0.98
LMO7-220ENST00000526528 CIZ1Q9ULV3 898 aaPredicted RBP8.91□□□□□ -0.98
LMO7-220ENST00000526528 ZRANB1Q9UGI0 708 aa8.89□□□□□ -0.99
LMO7-220ENST00000526528 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms