RNA–Protein interactions for RNA: ENST00000525911.5

CDKL1-204, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 3

Gene CDKL1, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-204ENST00000525911 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
CDKL1-204ENST00000525911 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
CDKL1-204ENST00000525911 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
CDKL1-204ENST00000525911 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
CDKL1-204ENST00000525911 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
CDKL1-204ENST00000525911 FOXD1Q16676 465 aa13.83□□□□□ -0.2
CDKL1-204ENST00000525911 MSH5O43196 834 aa13.22□□□□□ -0.29
CDKL1-204ENST00000525911 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
CDKL1-204ENST00000525911 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
CDKL1-204ENST00000525911 ADRA2BP18089 450 aa12.3□□□□□ -0.44
CDKL1-204ENST00000525911 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
CDKL1-204ENST00000525911 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
CDKL1-204ENST00000525911 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
CDKL1-204ENST00000525911 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
CDKL1-204ENST00000525911 SCAF1Q9H7N4 1312 aaKnown RBP11.24□□□□□ -0.61
CDKL1-204ENST00000525911 RNF39Q9H2S5 420 aa11.21□□□□□ -0.61
CDKL1-204ENST00000525911 DCAF8L1A6NGE4 600 aa11.2□□□□□ -0.62
CDKL1-204ENST00000525911 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
CDKL1-204ENST00000525911 POTEHQ6S545 545 aa10.96□□□□□ -0.65
CDKL1-204ENST00000525911 HOXD11P31277 338 aaPredicted RBP10.84□□□□□ -0.67
CDKL1-204ENST00000525911 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
CDKL1-204ENST00000525911 DNAJC5BQ9UF47 199 aa10.57□□□□□ -0.72
CDKL1-204ENST00000525911 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
CDKL1-204ENST00000525911 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
CDKL1-204ENST00000525911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDKL1-204ENST00000525911 DSG3P32926 999 aa10.25□□□□□ -0.77
CDKL1-204ENST00000525911 CAPN15O75808 1086 aa10.17□□□□□ -0.78
CDKL1-204ENST00000525911 SPINK5Q9NQ38 1064 aaPredicted RBP10.15□□□□□ -0.78
CDKL1-204ENST00000525911 U3KPZ7 1027 aaPredicted RBP10.04□□□□□ -0.8
CDKL1-204ENST00000525911 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
CDKL1-204ENST00000525911 CHRDL2Q6WN34 429 aa9.9□□□□□ -0.82
CDKL1-204ENST00000525911 NCBP3Q53F19 620 aaKnown RBP9.89□□□□□ -0.83
CDKL1-204ENST00000525911 ABCB7O75027 752 aa9.88□□□□□ -0.83
CDKL1-204ENST00000525911 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
CDKL1-204ENST00000525911 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
CDKL1-204ENST00000525911 ZNF219Q9P2Y4 722 aaPredicted RBP9.76□□□□□ -0.85
CDKL1-204ENST00000525911 NPM3O75607 178 aaKnown RBP9.75□□□□□ -0.85
CDKL1-204ENST00000525911 APLP2Q06481 763 aa9.68□□□□□ -0.86
CDKL1-204ENST00000525911 HAX1O00165 279 aa9.55□□□□□ -0.88
CDKL1-204ENST00000525911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
CDKL1-204ENST00000525911 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
CDKL1-204ENST00000525911 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
CDKL1-204ENST00000525911 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
CDKL1-204ENST00000525911 SAMD1Q6SPF0 538 aaPredicted RBP9.41□□□□□ -0.9
CDKL1-204ENST00000525911 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
CDKL1-204ENST00000525911 POLA2Q14181 598 aa9.39□□□□□ -0.91
CDKL1-204ENST00000525911 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
CDKL1-204ENST00000525911 EVX2Q03828 476 aa9.36□□□□□ -0.91
CDKL1-204ENST00000525911 REM2Q8IYK8 340 aaPredicted RBP9.34□□□□□ -0.91
CDKL1-204ENST00000525911 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDKL1-204ENST00000525911 LHX8Q68G74 356 aa9.3□□□□□ -0.92
CDKL1-204ENST00000525911 PITPNM1O00562 1244 aa9.26□□□□□ -0.93
CDKL1-204ENST00000525911 OSCARQ8IYS5 282 aa9.13□□□□□ -0.95
CDKL1-204ENST00000525911 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
CDKL1-204ENST00000525911 GABBR2O75899 941 aa9.1□□□□□ -0.95
CDKL1-204ENST00000525911 C19orf67A6NJJ6 358 aa9.03□□□□□ -0.96
CDKL1-204ENST00000525911 MYCNP04198 464 aaPredicted RBP9.03□□□□□ -0.96
CDKL1-204ENST00000525911 PRKAR2AP13861 404 aaKnown RBP9.02□□□□□ -0.97
CDKL1-204ENST00000525911 KCNA4P22459 653 aa8.93□□□□□ -0.98
CDKL1-204ENST00000525911 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
CDKL1-204ENST00000525911 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.98
CDKL1-204ENST00000525911 CLEC11AQ9Y240 323 aa8.88□□□□□ -0.99
CDKL1-204ENST00000525911 SPDYE1Q8NFV5 336 aaPredicted RBP8.82□□□□□ -1
CDKL1-204ENST00000525911 POTEMA6NI47 508 aa8.81□□□□□ -1
CDKL1-204ENST00000525911 SPDYE2BA6NHP3 402 aa8.78□□□□□ -1
CDKL1-204ENST00000525911 SPDYE6P0CI01 402 aa8.78□□□□□ -1
CDKL1-204ENST00000525911 SPDYE2Q495Y8 402 aa8.78□□□□□ -1
CDKL1-204ENST00000525911 CHADLQ6NUI6 762 aa8.78□□□□□ -1
CDKL1-204ENST00000525911 POTEGQ6S5H5 508 aa8.76□□□□□ -1.01
CDKL1-204ENST00000525911 DCBLD2Q96PD2 775 aa8.72□□□□□ -1.01
CDKL1-204ENST00000525911 OTUD5Q96G74 571 aa8.71□□□□□ -1.02
CDKL1-204ENST00000525911 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
CDKL1-204ENST00000525911 CLCN6P51797 869 aa8.66□□□□□ -1.02
CDKL1-204ENST00000525911 PCDH10Q9P2E7 1040 aa8.66□□□□□ -1.02
CDKL1-204ENST00000525911 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
CDKL1-204ENST00000525911 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
CDKL1-204ENST00000525911 FBLN2P98095 1184 aa8.6□□□□□ -1.03
CDKL1-204ENST00000525911 ZNF692Q9BU19 519 aaPredicted RBP8.57□□□□□ -1.04
CDKL1-204ENST00000525911 SSUH2Q9Y2M2 353 aa8.57□□□□□ -1.04
CDKL1-204ENST00000525911 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
CDKL1-204ENST00000525911 FOXD4L1Q9NU39 408 aa8.54□□□□□ -1.04
CDKL1-204ENST00000525911 ZNF579Q8NAF0 562 aaKnown RBP8.5□□□□□ -1.05
CDKL1-204ENST00000525911 GALR2O43603 387 aaPredicted RBP8.47□□□□□ -1.05
CDKL1-204ENST00000525911 ZRANB1Q9UGI0 708 aa8.46□□□□□ -1.06
CDKL1-204ENST00000525911 MKRN4PQ13434 485 aaPredicted RBP8.44□□□□□ -1.06
CDKL1-204ENST00000525911 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
CDKL1-204ENST00000525911 PABPN1Q86U42 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDKL1-204ENST00000525911 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
CDKL1-204ENST00000525911 PELP1Q8IZL8 1130 aaKnown RBP8.37□□□□□ -1.07
CDKL1-204ENST00000525911 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
CDKL1-204ENST00000525911 MAMSTRQ6ZN01 415 aa8.33□□□□□ -1.08
CDKL1-204ENST00000525911 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
CDKL1-204ENST00000525911 METRNQ9UJH8 293 aa8.32□□□□□ -1.08
CDKL1-204ENST00000525911 CDAN1Q8IWY9 1227 aa8.29□□□□□ -1.08
CDKL1-204ENST00000525911 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
CDKL1-204ENST00000525911 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
CDKL1-204ENST00000525911 SCUBE2Q9NQ36 999 aa8.26□□□□□ -1.09
CDKL1-204ENST00000525911 C7P10643 843 aa8.25□□□□□ -1.09
CDKL1-204ENST00000525911 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
CDKL1-204ENST00000525911 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms