RNA–Protein interactions for RNA: ENST00000525323.1

RNPC3-204, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 432 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-204ENST00000525323 AEBP2Q6ZN18 517 aaPredicted RBP25.97■■□□□ 1.75
RNPC3-204ENST00000525323 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
RNPC3-204ENST00000525323 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
RNPC3-204ENST00000525323 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
RNPC3-204ENST00000525323 FOXD1Q16676 465 aa20.49■□□□□ 0.87
RNPC3-204ENST00000525323 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
RNPC3-204ENST00000525323 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
RNPC3-204ENST00000525323 ADRA2BP18089 450 aa19.57■□□□□ 0.72
RNPC3-204ENST00000525323 PIAS4Q8N2W9 510 aaPredicted RBP19.27■□□□□ 0.68
RNPC3-204ENST00000525323 MSH5O43196 834 aa18.95■□□□□ 0.62
RNPC3-204ENST00000525323 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
RNPC3-204ENST00000525323 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
RNPC3-204ENST00000525323 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
RNPC3-204ENST00000525323 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
RNPC3-204ENST00000525323 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
RNPC3-204ENST00000525323 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
RNPC3-204ENST00000525323 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
RNPC3-204ENST00000525323 KCNA4P22459 653 aa17.32■□□□□ 0.36
RNPC3-204ENST00000525323 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
RNPC3-204ENST00000525323 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
RNPC3-204ENST00000525323 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
RNPC3-204ENST00000525323 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
RNPC3-204ENST00000525323 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
RNPC3-204ENST00000525323 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
RNPC3-204ENST00000525323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.2
RNPC3-204ENST00000525323 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
RNPC3-204ENST00000525323 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
RNPC3-204ENST00000525323 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
RNPC3-204ENST00000525323 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
RNPC3-204ENST00000525323 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
RNPC3-204ENST00000525323 ZBTB22O15209 634 aa15.95■□□□□ 0.14
RNPC3-204ENST00000525323 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
RNPC3-204ENST00000525323 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
RNPC3-204ENST00000525323 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
RNPC3-204ENST00000525323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
RNPC3-204ENST00000525323 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
RNPC3-204ENST00000525323 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
RNPC3-204ENST00000525323 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
RNPC3-204ENST00000525323 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
RNPC3-204ENST00000525323 APLP2Q06481 763 aa15.63■□□□□ 0.09
RNPC3-204ENST00000525323 CAPN15O75808 1086 aa15.59■□□□□ 0.09
RNPC3-204ENST00000525323 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
RNPC3-204ENST00000525323 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
RNPC3-204ENST00000525323 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
RNPC3-204ENST00000525323 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
RNPC3-204ENST00000525323 DSG3P32926 999 aa15.4■□□□□ 0.06
RNPC3-204ENST00000525323 ABCB7O75027 752 aa15.28■□□□□ 0.04
RNPC3-204ENST00000525323 POLA2Q14181 598 aa15.21■□□□□ 0.03
RNPC3-204ENST00000525323 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
RNPC3-204ENST00000525323 FBLN2P98095 1184 aa14.78□□□□□ -0.04
RNPC3-204ENST00000525323 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
RNPC3-204ENST00000525323 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
RNPC3-204ENST00000525323 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
RNPC3-204ENST00000525323 SPDYE2BA6NHP3 402 aa14.51□□□□□ -0.09
RNPC3-204ENST00000525323 SPDYE6P0CI01 402 aa14.51□□□□□ -0.09
RNPC3-204ENST00000525323 SPDYE2Q495Y8 402 aa14.51□□□□□ -0.09
RNPC3-204ENST00000525323 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
RNPC3-204ENST00000525323 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
RNPC3-204ENST00000525323 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
RNPC3-204ENST00000525323 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
RNPC3-204ENST00000525323 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
RNPC3-204ENST00000525323 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
RNPC3-204ENST00000525323 FKBP8Q14318 412 aa14.19□□□□□ -0.14
RNPC3-204ENST00000525323 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
RNPC3-204ENST00000525323 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
RNPC3-204ENST00000525323 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
RNPC3-204ENST00000525323 PROM2Q8N271 834 aa14.09□□□□□ -0.15
RNPC3-204ENST00000525323 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
RNPC3-204ENST00000525323 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
RNPC3-204ENST00000525323 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
RNPC3-204ENST00000525323 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
RNPC3-204ENST00000525323 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
RNPC3-204ENST00000525323 POTEHQ6S545 545 aa13.88□□□□□ -0.19
RNPC3-204ENST00000525323 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
RNPC3-204ENST00000525323 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
RNPC3-204ENST00000525323 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
RNPC3-204ENST00000525323 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
RNPC3-204ENST00000525323 MIER1Q8N108 512 aa13.63□□□□□ -0.23
RNPC3-204ENST00000525323 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
RNPC3-204ENST00000525323 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
RNPC3-204ENST00000525323 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
RNPC3-204ENST00000525323 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
RNPC3-204ENST00000525323 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
RNPC3-204ENST00000525323 HAX1O00165 279 aa13.5□□□□□ -0.25
RNPC3-204ENST00000525323 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
RNPC3-204ENST00000525323 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
RNPC3-204ENST00000525323 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
RNPC3-204ENST00000525323 EVX2Q03828 476 aa13.4□□□□□ -0.26
RNPC3-204ENST00000525323 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
RNPC3-204ENST00000525323 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
RNPC3-204ENST00000525323 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
RNPC3-204ENST00000525323 NUBP1P53384 320 aa13.31□□□□□ -0.28
RNPC3-204ENST00000525323 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
RNPC3-204ENST00000525323 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
RNPC3-204ENST00000525323 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
RNPC3-204ENST00000525323 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
RNPC3-204ENST00000525323 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
RNPC3-204ENST00000525323 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
RNPC3-204ENST00000525323 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
RNPC3-204ENST00000525323 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms