RNA–Protein interactions for RNA: ENST00000525231.5

VAV3-208, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-208ENST00000525231 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
VAV3-208ENST00000525231 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
VAV3-208ENST00000525231 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
VAV3-208ENST00000525231 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
VAV3-208ENST00000525231 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
VAV3-208ENST00000525231 FOXD1Q16676 465 aa14.56□□□□□ -0.08
VAV3-208ENST00000525231 MSH5O43196 834 aa14.01□□□□□ -0.17
VAV3-208ENST00000525231 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
VAV3-208ENST00000525231 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
VAV3-208ENST00000525231 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
VAV3-208ENST00000525231 ADRA2BP18089 450 aa13.03□□□□□ -0.32
VAV3-208ENST00000525231 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
VAV3-208ENST00000525231 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
VAV3-208ENST00000525231 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
VAV3-208ENST00000525231 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
VAV3-208ENST00000525231 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
VAV3-208ENST00000525231 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
VAV3-208ENST00000525231 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
VAV3-208ENST00000525231 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
VAV3-208ENST00000525231 DNAJC5BQ9UF47 199 aa11.46□□□□□ -0.57
VAV3-208ENST00000525231 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
VAV3-208ENST00000525231 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
VAV3-208ENST00000525231 POTEHQ6S545 545 aa11.33□□□□□ -0.6
VAV3-208ENST00000525231 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
VAV3-208ENST00000525231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
VAV3-208ENST00000525231 DSG3P32926 999 aa10.85□□□□□ -0.67
VAV3-208ENST00000525231 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
VAV3-208ENST00000525231 CAPN15O75808 1086 aa10.77□□□□□ -0.69
VAV3-208ENST00000525231 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
VAV3-208ENST00000525231 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
VAV3-208ENST00000525231 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
VAV3-208ENST00000525231 APLP2Q06481 763 aa10.56□□□□□ -0.72
VAV3-208ENST00000525231 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
VAV3-208ENST00000525231 RBM42Q9BTD8 480 aaKnown RBP10.5□□□□□ -0.73
VAV3-208ENST00000525231 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
VAV3-208ENST00000525231 CHRDL2Q6WN34 429 aa10.41□□□□□ -0.74
VAV3-208ENST00000525231 ABCB7O75027 752 aa10.4□□□□□ -0.74
VAV3-208ENST00000525231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
VAV3-208ENST00000525231 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
VAV3-208ENST00000525231 SP7Q8TDD2 431 aaPredicted RBP10.36□□□□□ -0.75
VAV3-208ENST00000525231 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
VAV3-208ENST00000525231 SLC4A2P04920 1241 aa10.21□□□□□ -0.77
VAV3-208ENST00000525231 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
VAV3-208ENST00000525231 POLA2Q14181 598 aa10.02□□□□□ -0.81
VAV3-208ENST00000525231 HAX1O00165 279 aa9.99□□□□□ -0.81
VAV3-208ENST00000525231 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
VAV3-208ENST00000525231 ZBTB12Q9Y330 459 aaPredicted RBP9.94□□□□□ -0.82
VAV3-208ENST00000525231 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
VAV3-208ENST00000525231 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
VAV3-208ENST00000525231 MYCNP04198 464 aaPredicted RBP9.86□□□□□ -0.83
VAV3-208ENST00000525231 PITPNM1O00562 1244 aa9.8□□□□□ -0.84
VAV3-208ENST00000525231 KCNA4P22459 653 aa9.78□□□□□ -0.84
VAV3-208ENST00000525231 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
VAV3-208ENST00000525231 EVX2Q03828 476 aa9.7□□□□□ -0.86
VAV3-208ENST00000525231 LHX8Q68G74 356 aa9.68□□□□□ -0.86
VAV3-208ENST00000525231 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
VAV3-208ENST00000525231 PRKAR2AP13861 404 aaKnown RBP9.56□□□□□ -0.88
VAV3-208ENST00000525231 GABBR2O75899 941 aa9.54□□□□□ -0.88
VAV3-208ENST00000525231 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
VAV3-208ENST00000525231 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
VAV3-208ENST00000525231 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
VAV3-208ENST00000525231 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
VAV3-208ENST00000525231 ATF5Q9Y2D1 282 aaPredicted RBP9.51□□□□□ -0.89
VAV3-208ENST00000525231 SPDYE1Q8NFV5 336 aaPredicted RBP9.49□□□□□ -0.89
VAV3-208ENST00000525231 FOXD4L1Q9NU39 408 aa9.42□□□□□ -0.9
VAV3-208ENST00000525231 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
VAV3-208ENST00000525231 CLCN6P51797 869 aa9.39□□□□□ -0.91
VAV3-208ENST00000525231 FBLN2P98095 1184 aa9.37□□□□□ -0.91
VAV3-208ENST00000525231 POTEIP0CG38 1075 aa9.29□□□□□ -0.92
VAV3-208ENST00000525231 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
VAV3-208ENST00000525231 ATXN8OSP0DMR3 200 aa9.25□□□□□ -0.93
VAV3-208ENST00000525231 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
VAV3-208ENST00000525231 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
VAV3-208ENST00000525231 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
VAV3-208ENST00000525231 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
VAV3-208ENST00000525231 DCBLD2Q96PD2 775 aa9.22□□□□□ -0.93
VAV3-208ENST00000525231 SLC4A1APQ9BWU0 796 aaKnown RBP9.17□□□□□ -0.94
VAV3-208ENST00000525231 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
VAV3-208ENST00000525231 POTEMA6NI47 508 aa9.15□□□□□ -0.94
VAV3-208ENST00000525231 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
VAV3-208ENST00000525231 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
VAV3-208ENST00000525231 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
VAV3-208ENST00000525231 MKRN4PQ13434 485 aaPredicted RBP9.09□□□□□ -0.95
VAV3-208ENST00000525231 POTEGQ6S5H5 508 aa9.09□□□□□ -0.95
VAV3-208ENST00000525231 PABPN1Q86U42 306 aaKnown RBP eCLIP9.06□□□□□ -0.96
VAV3-208ENST00000525231 ZRANB1Q9UGI0 708 aa8.99□□□□□ -0.97
VAV3-208ENST00000525231 POTEB2H3BUK9 544 aa8.95□□□□□ -0.98
VAV3-208ENST00000525231 ZBTB22O15209 634 aa8.94□□□□□ -0.98
VAV3-208ENST00000525231 GALR2O43603 387 aaPredicted RBP8.94□□□□□ -0.98
VAV3-208ENST00000525231 MAMSTRQ6ZN01 415 aa8.9□□□□□ -0.98
VAV3-208ENST00000525231 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
VAV3-208ENST00000525231 C7P10643 843 aa8.82□□□□□ -1
VAV3-208ENST00000525231 SLC39A7Q92504 469 aa8.82□□□□□ -1
VAV3-208ENST00000525231 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
VAV3-208ENST00000525231 METRNQ9UJH8 293 aa8.81□□□□□ -1
VAV3-208ENST00000525231 CREBZFQ9NS37 354 aa8.8□□□□□ -1
VAV3-208ENST00000525231 SCUBE2Q9NQ36 999 aa8.79□□□□□ -1
VAV3-208ENST00000525231 ASTLQ6HA08 431 aaPredicted RBP8.78□□□□□ -1
VAV3-208ENST00000525231 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
VAV3-208ENST00000525231 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms