RNA–Protein interactions for RNA: ENST00000523278.5

UBE2W-206, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-206ENST00000523278 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
UBE2W-206ENST00000523278 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
UBE2W-206ENST00000523278 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
UBE2W-206ENST00000523278 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
UBE2W-206ENST00000523278 FOXD1Q16676 465 aa20.15■□□□□ 0.82
UBE2W-206ENST00000523278 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
UBE2W-206ENST00000523278 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
UBE2W-206ENST00000523278 ADRA2BP18089 450 aa19.19■□□□□ 0.66
UBE2W-206ENST00000523278 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
UBE2W-206ENST00000523278 MSH5O43196 834 aa18.68■□□□□ 0.58
UBE2W-206ENST00000523278 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
UBE2W-206ENST00000523278 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
UBE2W-206ENST00000523278 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
UBE2W-206ENST00000523278 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
UBE2W-206ENST00000523278 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
UBE2W-206ENST00000523278 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
UBE2W-206ENST00000523278 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
UBE2W-206ENST00000523278 KCNA4P22459 653 aa17■□□□□ 0.31
UBE2W-206ENST00000523278 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
UBE2W-206ENST00000523278 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
UBE2W-206ENST00000523278 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
UBE2W-206ENST00000523278 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
UBE2W-206ENST00000523278 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
UBE2W-206ENST00000523278 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
UBE2W-206ENST00000523278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE2W-206ENST00000523278 RNF39Q9H2S5 420 aa16■□□□□ 0.15
UBE2W-206ENST00000523278 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
UBE2W-206ENST00000523278 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
UBE2W-206ENST00000523278 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
UBE2W-206ENST00000523278 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
UBE2W-206ENST00000523278 ZBTB22O15209 634 aa15.66■□□□□ 0.1
UBE2W-206ENST00000523278 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
UBE2W-206ENST00000523278 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
UBE2W-206ENST00000523278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
UBE2W-206ENST00000523278 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
UBE2W-206ENST00000523278 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
UBE2W-206ENST00000523278 APLP2Q06481 763 aa15.43■□□□□ 0.06
UBE2W-206ENST00000523278 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
UBE2W-206ENST00000523278 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
UBE2W-206ENST00000523278 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
UBE2W-206ENST00000523278 CAPN15O75808 1086 aa15.28■□□□□ 0.04
UBE2W-206ENST00000523278 ATXN8OSP0DMR3 200 aa15.25■□□□□ 0.03
UBE2W-206ENST00000523278 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
UBE2W-206ENST00000523278 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
UBE2W-206ENST00000523278 ATF5Q9Y2D1 282 aaPredicted RBP15.16■□□□□ 0.02
UBE2W-206ENST00000523278 DSG3P32926 999 aa15.15■□□□□ 0.02
UBE2W-206ENST00000523278 ABCB7O75027 752 aa14.97□□□□□ -0.01
UBE2W-206ENST00000523278 POLA2Q14181 598 aa14.92□□□□□ -0.02
UBE2W-206ENST00000523278 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
UBE2W-206ENST00000523278 FBLN2P98095 1184 aa14.54□□□□□ -0.08
UBE2W-206ENST00000523278 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
UBE2W-206ENST00000523278 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
UBE2W-206ENST00000523278 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
UBE2W-206ENST00000523278 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
UBE2W-206ENST00000523278 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
UBE2W-206ENST00000523278 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
UBE2W-206ENST00000523278 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
UBE2W-206ENST00000523278 SSUH2Q9Y2M2 353 aa14.19□□□□□ -0.14
UBE2W-206ENST00000523278 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
UBE2W-206ENST00000523278 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
UBE2W-206ENST00000523278 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
UBE2W-206ENST00000523278 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBE2W-206ENST00000523278 PROM2Q8N271 834 aa13.92□□□□□ -0.18
UBE2W-206ENST00000523278 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
UBE2W-206ENST00000523278 FKBP8Q14318 412 aa13.9□□□□□ -0.18
UBE2W-206ENST00000523278 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
UBE2W-206ENST00000523278 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
UBE2W-206ENST00000523278 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
UBE2W-206ENST00000523278 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
UBE2W-206ENST00000523278 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
UBE2W-206ENST00000523278 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
UBE2W-206ENST00000523278 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
UBE2W-206ENST00000523278 POTEHQ6S545 545 aa13.65□□□□□ -0.22
UBE2W-206ENST00000523278 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
UBE2W-206ENST00000523278 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
UBE2W-206ENST00000523278 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
UBE2W-206ENST00000523278 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
UBE2W-206ENST00000523278 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
UBE2W-206ENST00000523278 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
UBE2W-206ENST00000523278 MIER1Q8N108 512 aa13.35□□□□□ -0.27
UBE2W-206ENST00000523278 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
UBE2W-206ENST00000523278 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
UBE2W-206ENST00000523278 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
UBE2W-206ENST00000523278 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
UBE2W-206ENST00000523278 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE2W-206ENST00000523278 HAX1O00165 279 aa13.24□□□□□ -0.29
UBE2W-206ENST00000523278 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
UBE2W-206ENST00000523278 EVX2Q03828 476 aa13.15□□□□□ -0.3
UBE2W-206ENST00000523278 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
UBE2W-206ENST00000523278 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
UBE2W-206ENST00000523278 NUBP1P53384 320 aa13.09□□□□□ -0.31
UBE2W-206ENST00000523278 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
UBE2W-206ENST00000523278 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
UBE2W-206ENST00000523278 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
UBE2W-206ENST00000523278 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
UBE2W-206ENST00000523278 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
UBE2W-206ENST00000523278 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
UBE2W-206ENST00000523278 SPOCK2Q92563 424 aa13□□□□□ -0.33
UBE2W-206ENST00000523278 CLCN6P51797 869 aa12.97□□□□□ -0.33
UBE2W-206ENST00000523278 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms