RNA–Protein interactions for RNA: ENST00000522137.1

SMIM20-204, Transcript of small integral membrane protein 20, humanhuman

TSL 2

Gene SMIM20, Length 427 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-204ENST00000522137 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
SMIM20-204ENST00000522137 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
SMIM20-204ENST00000522137 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
SMIM20-204ENST00000522137 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
SMIM20-204ENST00000522137 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
SMIM20-204ENST00000522137 FOXD1Q16676 465 aa20.57■□□□□ 0.88
SMIM20-204ENST00000522137 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
SMIM20-204ENST00000522137 ADRA2BP18089 450 aa19.78■□□□□ 0.76
SMIM20-204ENST00000522137 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
SMIM20-204ENST00000522137 MSH5O43196 834 aa19.02■□□□□ 0.64
SMIM20-204ENST00000522137 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
SMIM20-204ENST00000522137 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
SMIM20-204ENST00000522137 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
SMIM20-204ENST00000522137 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
SMIM20-204ENST00000522137 KCNA4P22459 653 aa17.85■□□□□ 0.45
SMIM20-204ENST00000522137 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
SMIM20-204ENST00000522137 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
SMIM20-204ENST00000522137 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
SMIM20-204ENST00000522137 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
SMIM20-204ENST00000522137 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
SMIM20-204ENST00000522137 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
SMIM20-204ENST00000522137 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
SMIM20-204ENST00000522137 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
SMIM20-204ENST00000522137 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
SMIM20-204ENST00000522137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMIM20-204ENST00000522137 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
SMIM20-204ENST00000522137 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
SMIM20-204ENST00000522137 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
SMIM20-204ENST00000522137 ZBTB22O15209 634 aa16.41■□□□□ 0.22
SMIM20-204ENST00000522137 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
SMIM20-204ENST00000522137 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
SMIM20-204ENST00000522137 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
SMIM20-204ENST00000522137 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
SMIM20-204ENST00000522137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
SMIM20-204ENST00000522137 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
SMIM20-204ENST00000522137 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SMIM20-204ENST00000522137 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
SMIM20-204ENST00000522137 APLP2Q06481 763 aa15.97■□□□□ 0.15
SMIM20-204ENST00000522137 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
SMIM20-204ENST00000522137 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
SMIM20-204ENST00000522137 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
SMIM20-204ENST00000522137 CAPN15O75808 1086 aa15.76■□□□□ 0.11
SMIM20-204ENST00000522137 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
SMIM20-204ENST00000522137 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
SMIM20-204ENST00000522137 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
SMIM20-204ENST00000522137 DSG3P32926 999 aa15.48■□□□□ 0.07
SMIM20-204ENST00000522137 POLA2Q14181 598 aa15.44■□□□□ 0.06
SMIM20-204ENST00000522137 ABCB7O75027 752 aa15.43■□□□□ 0.06
SMIM20-204ENST00000522137 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
SMIM20-204ENST00000522137 FBLN2P98095 1184 aa15.16■□□□□ 0.02
SMIM20-204ENST00000522137 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
SMIM20-204ENST00000522137 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
SMIM20-204ENST00000522137 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
SMIM20-204ENST00000522137 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
SMIM20-204ENST00000522137 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
SMIM20-204ENST00000522137 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
SMIM20-204ENST00000522137 FKBP8Q14318 412 aa14.79□□□□□ -0.04
SMIM20-204ENST00000522137 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
SMIM20-204ENST00000522137 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
SMIM20-204ENST00000522137 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
SMIM20-204ENST00000522137 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
SMIM20-204ENST00000522137 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMIM20-204ENST00000522137 PROM2Q8N271 834 aa14.53□□□□□ -0.08
SMIM20-204ENST00000522137 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
SMIM20-204ENST00000522137 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
SMIM20-204ENST00000522137 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
SMIM20-204ENST00000522137 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
SMIM20-204ENST00000522137 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
SMIM20-204ENST00000522137 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
SMIM20-204ENST00000522137 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
SMIM20-204ENST00000522137 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
SMIM20-204ENST00000522137 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
SMIM20-204ENST00000522137 MIER1Q8N108 512 aa14.03□□□□□ -0.16
SMIM20-204ENST00000522137 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMIM20-204ENST00000522137 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
SMIM20-204ENST00000522137 PLEKHG5O94827 1062 aa14□□□□□ -0.17
SMIM20-204ENST00000522137 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
SMIM20-204ENST00000522137 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
SMIM20-204ENST00000522137 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
SMIM20-204ENST00000522137 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
SMIM20-204ENST00000522137 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
SMIM20-204ENST00000522137 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
SMIM20-204ENST00000522137 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
SMIM20-204ENST00000522137 MNX1P50219 401 aaPredicted RBP13.8□□□□□ -0.2
SMIM20-204ENST00000522137 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
SMIM20-204ENST00000522137 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMIM20-204ENST00000522137 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
SMIM20-204ENST00000522137 POTEHQ6S545 545 aa13.68□□□□□ -0.22
SMIM20-204ENST00000522137 NUBP1P53384 320 aa13.64□□□□□ -0.23
SMIM20-204ENST00000522137 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
SMIM20-204ENST00000522137 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
SMIM20-204ENST00000522137 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
SMIM20-204ENST00000522137 GSE1Q14687 1217 aa13.54□□□□□ -0.24
SMIM20-204ENST00000522137 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
SMIM20-204ENST00000522137 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
SMIM20-204ENST00000522137 HAX1O00165 279 aa13.53□□□□□ -0.24
SMIM20-204ENST00000522137 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
SMIM20-204ENST00000522137 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
SMIM20-204ENST00000522137 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
SMIM20-204ENST00000522137 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms