RNA–Protein interactions for RNA: ENST00000521120.1

LARP4-209, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 2

Gene LARP4, Length 987 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-209ENST00000521120 AEBP2Q6ZN18 517 aaPredicted RBP37.54■■■■□ 3.6
LARP4-209ENST00000521120 CHIC1Q5VXU3 224 aa36.71■■■■□ 3.47
LARP4-209ENST00000521120 PHF23Q9BUL5 403 aaPredicted RBP32.17■■■□□ 2.74
LARP4-209ENST00000521120 SENP3Q9H4L4 574 aaPredicted RBP32.06■■■□□ 2.72
LARP4-209ENST00000521120 PLPPR3Q6T4P5 718 aa29.87■■■□□ 2.37
LARP4-209ENST00000521120 FOXD1Q16676 465 aa29.63■■■□□ 2.33
LARP4-209ENST00000521120 ADRA2BP18089 450 aa28.41■■■□□ 2.14
LARP4-209ENST00000521120 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.14
LARP4-209ENST00000521120 PIAS4Q8N2W9 510 aaPredicted RBP28.03■■■□□ 2.08
LARP4-209ENST00000521120 MSH5O43196 834 aa27.5■■□□□ 1.99
LARP4-209ENST00000521120 PPP4R3CPQ6ZMV5 832 aa26.24■■□□□ 1.79
LARP4-209ENST00000521120 SCAF1Q9H7N4 1312 aaKnown RBP26.2■■□□□ 1.79
LARP4-209ENST00000521120 MAPK8IP2Q13387 824 aaPredicted RBP25.75■■□□□ 1.71
LARP4-209ENST00000521120 NCBP3Q53F19 620 aaKnown RBP25.66■■□□□ 1.7
LARP4-209ENST00000521120 CNKSR2Q8WXI2 1034 aa25.57■■□□□ 1.68
LARP4-209ENST00000521120 KCNA4P22459 653 aa25.53■■□□□ 1.68
LARP4-209ENST00000521120 DMRT2Q9Y5R5 561 aa25.52■■□□□ 1.68
LARP4-209ENST00000521120 NPM3O75607 178 aaKnown RBP25.15■■□□□ 1.62
LARP4-209ENST00000521120 RNF216Q9NWF9 866 aaPredicted RBP25.08■■□□□ 1.61
LARP4-209ENST00000521120 POTEDQ86YR6 584 aa25.02■■□□□ 1.6
LARP4-209ENST00000521120 HOXD11P31277 338 aaPredicted RBP24.95■■□□□ 1.58
LARP4-209ENST00000521120 DCAF8L1A6NGE4 600 aa24.49■■□□□ 1.51
LARP4-209ENST00000521120 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
LARP4-209ENST00000521120 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
LARP4-209ENST00000521120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.41
LARP4-209ENST00000521120 SLC4A2P04920 1241 aa23.71■■□□□ 1.39
LARP4-209ENST00000521120 FOXD4L1Q9NU39 408 aa23.61■■□□□ 1.37
LARP4-209ENST00000521120 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
LARP4-209ENST00000521120 RNF39Q9H2S5 420 aa23.47■■□□□ 1.35
LARP4-209ENST00000521120 ZBTB22O15209 634 aa23.43■■□□□ 1.34
LARP4-209ENST00000521120 U3KPZ7 1027 aaPredicted RBP23.38■■□□□ 1.33
LARP4-209ENST00000521120 MYCNP04198 464 aaPredicted RBP23.33■■□□□ 1.33
LARP4-209ENST00000521120 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
LARP4-209ENST00000521120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
LARP4-209ENST00000521120 C1QBPQ07021 282 aaKnown RBP23.25■■□□□ 1.31
LARP4-209ENST00000521120 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
LARP4-209ENST00000521120 SAMD1Q6SPF0 538 aaPredicted RBP23.12■■□□□ 1.29
LARP4-209ENST00000521120 APLP2Q06481 763 aa23.06■■□□□ 1.28
LARP4-209ENST00000521120 CACNB1Q02641 598 aaPredicted RBP22.95■■□□□ 1.26
LARP4-209ENST00000521120 ATXN8OSP0DMR3 200 aa22.81■■□□□ 1.24
LARP4-209ENST00000521120 CAPN15O75808 1086 aa22.74■■□□□ 1.23
LARP4-209ENST00000521120 SPINK5Q9NQ38 1064 aaPredicted RBP22.71■■□□□ 1.23
LARP4-209ENST00000521120 ZNF219Q9P2Y4 722 aaPredicted RBP22.66■■□□□ 1.22
LARP4-209ENST00000521120 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
LARP4-209ENST00000521120 ATF5Q9Y2D1 282 aaPredicted RBP22.54■■□□□ 1.2
LARP4-209ENST00000521120 DSG3P32926 999 aa22.29■■□□□ 1.16
LARP4-209ENST00000521120 ABCB7O75027 752 aa22.23■■□□□ 1.15
LARP4-209ENST00000521120 POLA2Q14181 598 aa22.19■■□□□ 1.14
LARP4-209ENST00000521120 ZBTB12Q9Y330 459 aaPredicted RBP21.97■■□□□ 1.11
LARP4-209ENST00000521120 FBLN2P98095 1184 aa21.82■■□□□ 1.08
LARP4-209ENST00000521120 MKRN4PQ13434 485 aaPredicted RBP21.58■■□□□ 1.05
LARP4-209ENST00000521120 OSCARQ8IYS5 282 aa21.45■■□□□ 1.02
LARP4-209ENST00000521120 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
LARP4-209ENST00000521120 SPDYE2BA6NHP3 402 aa21.29■■□□□ 1
LARP4-209ENST00000521120 SPDYE6P0CI01 402 aa21.29■■□□□ 1
LARP4-209ENST00000521120 SPDYE2Q495Y8 402 aa21.29■■□□□ 1
LARP4-209ENST00000521120 SPDYE4A6NLX3 237 aa21.19■□□□□ 0.98
LARP4-209ENST00000521120 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
LARP4-209ENST00000521120 FKBP8Q14318 412 aa21.14■□□□□ 0.97
LARP4-209ENST00000521120 AKT1S1Q96B36 256 aa21.05■□□□□ 0.96
LARP4-209ENST00000521120 SSUH2Q9Y2M2 353 aa21.05■□□□□ 0.96
LARP4-209ENST00000521120 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
LARP4-209ENST00000521120 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
LARP4-209ENST00000521120 PROM2Q8N271 834 aa20.76■□□□□ 0.91
LARP4-209ENST00000521120 SPDYE1Q8NFV5 336 aaPredicted RBP20.7■□□□□ 0.9
LARP4-209ENST00000521120 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
LARP4-209ENST00000521120 CLEC11AQ9Y240 323 aa20.57■□□□□ 0.88
LARP4-209ENST00000521120 PITPNM1O00562 1244 aa20.56■□□□□ 0.88
LARP4-209ENST00000521120 FBXO3Q9UK99 471 aa20.51■□□□□ 0.87
LARP4-209ENST00000521120 CHRDL2Q6WN34 429 aa20.44■□□□□ 0.86
LARP4-209ENST00000521120 PRR29P0C7W0 189 aa20.39■□□□□ 0.85
LARP4-209ENST00000521120 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
LARP4-209ENST00000521120 FXR2P51116 673 aaKnown RBP eCLIP20.17■□□□□ 0.82
LARP4-209ENST00000521120 VASPP50552 380 aaPredicted RBP20.14■□□□□ 0.81
LARP4-209ENST00000521120 PLCD3Q8N3E9 789 aa20.12■□□□□ 0.81
LARP4-209ENST00000521120 PIP4P2Q8N4L2 257 aa20.12■□□□□ 0.81
LARP4-209ENST00000521120 MIER1Q8N108 512 aa20.11■□□□□ 0.81
LARP4-209ENST00000521120 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
LARP4-209ENST00000521120 CREBZFQ9NS37 354 aa20.02■□□□□ 0.8
LARP4-209ENST00000521120 CHADLQ6NUI6 762 aa19.99■□□□□ 0.79
LARP4-209ENST00000521120 ZBTB47Q9UFB7 747 aaPredicted RBP19.98■□□□□ 0.79
LARP4-209ENST00000521120 KLHL34Q8N239 644 aa19.86■□□□□ 0.77
LARP4-209ENST00000521120 FARP1Q9Y4F1 1045 aaPredicted RBP19.85■□□□□ 0.77
LARP4-209ENST00000521120 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
LARP4-209ENST00000521120 POTEHQ6S545 545 aa19.84■□□□□ 0.77
LARP4-209ENST00000521120 IFNLR1Q8IU57 520 aaPredicted RBP19.79■□□□□ 0.76
LARP4-209ENST00000521120 MNX1P50219 401 aaPredicted RBP19.77■□□□□ 0.76
LARP4-209ENST00000521120 SPOCK2Q92563 424 aa19.66■□□□□ 0.74
LARP4-209ENST00000521120 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
LARP4-209ENST00000521120 HAX1O00165 279 aa19.55■□□□□ 0.72
LARP4-209ENST00000521120 NUBP1P53384 320 aa19.53■□□□□ 0.72
LARP4-209ENST00000521120 CD44P16070 742 aaKnown RBP19.51■□□□□ 0.71
LARP4-209ENST00000521120 FAM212AQ96EL1 285 aa19.51■□□□□ 0.71
LARP4-209ENST00000521120 C19orf67A6NJJ6 358 aa19.49■□□□□ 0.71
LARP4-209ENST00000521120 RASEFQ8IZ41 740 aa19.47■□□□□ 0.71
LARP4-209ENST00000521120 GSE1Q14687 1217 aa19.43■□□□□ 0.7
LARP4-209ENST00000521120 TSPYL2Q9H2G4 693 aaPredicted RBP19.42■□□□□ 0.7
LARP4-209ENST00000521120 DCAF8Q5TAQ9 597 aa19.4■□□□□ 0.7
LARP4-209ENST00000521120 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
LARP4-209ENST00000521120 CIZ1Q9ULV3 898 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms