RNA–Protein interactions for RNA: ENST00000521013.1

RDH10-204, Transcript of retinol dehydrogenase 10, humanhuman

TSL 2

Gene RDH10, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH10-204ENST00000521013 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.79
RDH10-204ENST00000521013 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
RDH10-204ENST00000521013 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
RDH10-204ENST00000521013 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
RDH10-204ENST00000521013 FOXD1Q16676 465 aa25.62■■□□□ 1.69
RDH10-204ENST00000521013 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
RDH10-204ENST00000521013 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
RDH10-204ENST00000521013 ADRA2BP18089 450 aa24.46■■□□□ 1.51
RDH10-204ENST00000521013 PIAS4Q8N2W9 510 aaPredicted RBP24.13■■□□□ 1.45
RDH10-204ENST00000521013 MSH5O43196 834 aa23.73■■□□□ 1.39
RDH10-204ENST00000521013 PPP4R3CPQ6ZMV5 832 aa22.44■■□□□ 1.18
RDH10-204ENST00000521013 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
RDH10-204ENST00000521013 MAPK8IP2Q13387 824 aaPredicted RBP22.25■■□□□ 1.15
RDH10-204ENST00000521013 DMRT2Q9Y5R5 561 aa21.99■■□□□ 1.11
RDH10-204ENST00000521013 POTEDQ86YR6 584 aa21.96■■□□□ 1.11
RDH10-204ENST00000521013 CNKSR2Q8WXI2 1034 aa21.87■■□□□ 1.09
RDH10-204ENST00000521013 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
RDH10-204ENST00000521013 KCNA4P22459 653 aa21.68■■□□□ 1.06
RDH10-204ENST00000521013 RNF216Q9NWF9 866 aaPredicted RBP21.48■■□□□ 1.03
RDH10-204ENST00000521013 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
RDH10-204ENST00000521013 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
RDH10-204ENST00000521013 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
RDH10-204ENST00000521013 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
RDH10-204ENST00000521013 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
RDH10-204ENST00000521013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
RDH10-204ENST00000521013 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
RDH10-204ENST00000521013 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
RDH10-204ENST00000521013 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
RDH10-204ENST00000521013 C1QBPQ07021 282 aaKnown RBP20.06■□□□□ 0.8
RDH10-204ENST00000521013 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
RDH10-204ENST00000521013 CACNB1Q02641 598 aaPredicted RBP19.94■□□□□ 0.78
RDH10-204ENST00000521013 ZBTB22O15209 634 aa19.93■□□□□ 0.78
RDH10-204ENST00000521013 MYCNP04198 464 aaPredicted RBP19.86■□□□□ 0.77
RDH10-204ENST00000521013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
RDH10-204ENST00000521013 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
RDH10-204ENST00000521013 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
RDH10-204ENST00000521013 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
RDH10-204ENST00000521013 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
RDH10-204ENST00000521013 APLP2Q06481 763 aa19.64■□□□□ 0.73
RDH10-204ENST00000521013 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
RDH10-204ENST00000521013 CAPN15O75808 1086 aa19.54■□□□□ 0.72
RDH10-204ENST00000521013 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
RDH10-204ENST00000521013 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
RDH10-204ENST00000521013 ATXN8OSP0DMR3 200 aa19.34■□□□□ 0.69
RDH10-204ENST00000521013 ATF5Q9Y2D1 282 aaPredicted RBP19.32■□□□□ 0.68
RDH10-204ENST00000521013 DSG3P32926 999 aa19.25■□□□□ 0.67
RDH10-204ENST00000521013 ABCB7O75027 752 aa19.14■□□□□ 0.65
RDH10-204ENST00000521013 POLA2Q14181 598 aa19.02■□□□□ 0.64
RDH10-204ENST00000521013 ZBTB12Q9Y330 459 aaPredicted RBP18.71■□□□□ 0.59
RDH10-204ENST00000521013 FBLN2P98095 1184 aa18.55■□□□□ 0.56
RDH10-204ENST00000521013 MKRN4PQ13434 485 aaPredicted RBP18.47■□□□□ 0.55
RDH10-204ENST00000521013 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
RDH10-204ENST00000521013 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
RDH10-204ENST00000521013 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
RDH10-204ENST00000521013 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
RDH10-204ENST00000521013 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
RDH10-204ENST00000521013 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
RDH10-204ENST00000521013 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.49
RDH10-204ENST00000521013 SSUH2Q9Y2M2 353 aa18.01■□□□□ 0.47
RDH10-204ENST00000521013 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
RDH10-204ENST00000521013 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
RDH10-204ENST00000521013 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.45
RDH10-204ENST00000521013 FKBP8Q14318 412 aa17.79■□□□□ 0.44
RDH10-204ENST00000521013 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
RDH10-204ENST00000521013 SPDYE1Q8NFV5 336 aaPredicted RBP17.7■□□□□ 0.42
RDH10-204ENST00000521013 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
RDH10-204ENST00000521013 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
RDH10-204ENST00000521013 PROM2Q8N271 834 aa17.63■□□□□ 0.41
RDH10-204ENST00000521013 STAG3Q9UJ98 1225 aa17.5■□□□□ 0.39
RDH10-204ENST00000521013 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
RDH10-204ENST00000521013 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
RDH10-204ENST00000521013 PIP4P2Q8N4L2 257 aa17.4■□□□□ 0.38
RDH10-204ENST00000521013 POTEHQ6S545 545 aa17.36■□□□□ 0.37
RDH10-204ENST00000521013 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.35
RDH10-204ENST00000521013 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
RDH10-204ENST00000521013 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
RDH10-204ENST00000521013 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
RDH10-204ENST00000521013 MIER1Q8N108 512 aa17.07■□□□□ 0.32
RDH10-204ENST00000521013 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
RDH10-204ENST00000521013 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
RDH10-204ENST00000521013 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.32
RDH10-204ENST00000521013 VASPP50552 380 aaPredicted RBP16.99■□□□□ 0.31
RDH10-204ENST00000521013 MNX1P50219 401 aaPredicted RBP16.94■□□□□ 0.3
RDH10-204ENST00000521013 HAX1O00165 279 aa16.9■□□□□ 0.3
RDH10-204ENST00000521013 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
RDH10-204ENST00000521013 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
RDH10-204ENST00000521013 C19orf67A6NJJ6 358 aa16.83■□□□□ 0.28
RDH10-204ENST00000521013 CD44P16070 742 aaKnown RBP16.76■□□□□ 0.27
RDH10-204ENST00000521013 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
RDH10-204ENST00000521013 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
RDH10-204ENST00000521013 EVX2Q03828 476 aa16.72■□□□□ 0.27
RDH10-204ENST00000521013 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
RDH10-204ENST00000521013 NUBP1P53384 320 aa16.64■□□□□ 0.26
RDH10-204ENST00000521013 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
RDH10-204ENST00000521013 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
RDH10-204ENST00000521013 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
RDH10-204ENST00000521013 TSPYL2Q9H2G4 693 aaPredicted RBP16.6■□□□□ 0.25
RDH10-204ENST00000521013 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
RDH10-204ENST00000521013 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
RDH10-204ENST00000521013 FAM212AQ96EL1 285 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms