RNA–Protein interactions for RNA: ENST00000520550.1

PIK3R1-209, Transcript of phosphoinositide-3-kinase regulatory subunit 1, humanhuman

TSL 2

Gene PIK3R1, Length 1,468 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R1-209ENST00000520550 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
PIK3R1-209ENST00000520550 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.05
PIK3R1-209ENST00000520550 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
PIK3R1-209ENST00000520550 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
PIK3R1-209ENST00000520550 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
PIK3R1-209ENST00000520550 FOXD1Q16676 465 aa22.44■■□□□ 1.18
PIK3R1-209ENST00000520550 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
PIK3R1-209ENST00000520550 ADRA2BP18089 450 aa21.56■■□□□ 1.04
PIK3R1-209ENST00000520550 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
PIK3R1-209ENST00000520550 MSH5O43196 834 aa20.76■□□□□ 0.91
PIK3R1-209ENST00000520550 PPP4R3CPQ6ZMV5 832 aa19.95■□□□□ 0.78
PIK3R1-209ENST00000520550 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
PIK3R1-209ENST00000520550 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
PIK3R1-209ENST00000520550 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
PIK3R1-209ENST00000520550 KCNA4P22459 653 aa19.46■□□□□ 0.71
PIK3R1-209ENST00000520550 CNKSR2Q8WXI2 1034 aa19.42■□□□□ 0.7
PIK3R1-209ENST00000520550 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
PIK3R1-209ENST00000520550 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
PIK3R1-209ENST00000520550 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
PIK3R1-209ENST00000520550 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
PIK3R1-209ENST00000520550 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
PIK3R1-209ENST00000520550 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
PIK3R1-209ENST00000520550 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
PIK3R1-209ENST00000520550 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
PIK3R1-209ENST00000520550 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
PIK3R1-209ENST00000520550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
PIK3R1-209ENST00000520550 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
PIK3R1-209ENST00000520550 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
PIK3R1-209ENST00000520550 ZBTB22O15209 634 aa17.88■□□□□ 0.45
PIK3R1-209ENST00000520550 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
PIK3R1-209ENST00000520550 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
PIK3R1-209ENST00000520550 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
PIK3R1-209ENST00000520550 MYCNP04198 464 aaPredicted RBP17.71■□□□□ 0.43
PIK3R1-209ENST00000520550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
PIK3R1-209ENST00000520550 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
PIK3R1-209ENST00000520550 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.41
PIK3R1-209ENST00000520550 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
PIK3R1-209ENST00000520550 APLP2Q06481 763 aa17.44■□□□□ 0.38
PIK3R1-209ENST00000520550 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
PIK3R1-209ENST00000520550 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
PIK3R1-209ENST00000520550 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
PIK3R1-209ENST00000520550 CAPN15O75808 1086 aa17.18■□□□□ 0.34
PIK3R1-209ENST00000520550 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
PIK3R1-209ENST00000520550 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
PIK3R1-209ENST00000520550 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
PIK3R1-209ENST00000520550 DSG3P32926 999 aa16.9■□□□□ 0.3
PIK3R1-209ENST00000520550 ABCB7O75027 752 aa16.82■□□□□ 0.28
PIK3R1-209ENST00000520550 POLA2Q14181 598 aa16.82■□□□□ 0.28
PIK3R1-209ENST00000520550 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
PIK3R1-209ENST00000520550 FBLN2P98095 1184 aa16.54■□□□□ 0.24
PIK3R1-209ENST00000520550 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
PIK3R1-209ENST00000520550 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
PIK3R1-209ENST00000520550 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
PIK3R1-209ENST00000520550 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
PIK3R1-209ENST00000520550 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
PIK3R1-209ENST00000520550 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
PIK3R1-209ENST00000520550 FKBP8Q14318 412 aa16.12■□□□□ 0.17
PIK3R1-209ENST00000520550 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
PIK3R1-209ENST00000520550 ZNF692Q9BU19 519 aaPredicted RBP16.06■□□□□ 0.16
PIK3R1-209ENST00000520550 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
PIK3R1-209ENST00000520550 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
PIK3R1-209ENST00000520550 PROM2Q8N271 834 aa15.85■□□□□ 0.13
PIK3R1-209ENST00000520550 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
PIK3R1-209ENST00000520550 REM2Q8IYK8 340 aaPredicted RBP15.76■□□□□ 0.11
PIK3R1-209ENST00000520550 SPDYE1Q8NFV5 336 aaPredicted RBP15.67■□□□□ 0.1
PIK3R1-209ENST00000520550 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
PIK3R1-209ENST00000520550 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
PIK3R1-209ENST00000520550 PITPNM1O00562 1244 aa15.56■□□□□ 0.08
PIK3R1-209ENST00000520550 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
PIK3R1-209ENST00000520550 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
PIK3R1-209ENST00000520550 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
PIK3R1-209ENST00000520550 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
PIK3R1-209ENST00000520550 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
PIK3R1-209ENST00000520550 MIER1Q8N108 512 aa15.27■□□□□ 0.04
PIK3R1-209ENST00000520550 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.03
PIK3R1-209ENST00000520550 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
PIK3R1-209ENST00000520550 PIP4P2Q8N4L2 257 aa15.22■□□□□ 0.03
PIK3R1-209ENST00000520550 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
PIK3R1-209ENST00000520550 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
PIK3R1-209ENST00000520550 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
PIK3R1-209ENST00000520550 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
PIK3R1-209ENST00000520550 IFNLR1Q8IU57 520 aaPredicted RBP15.12■□□□□ 0.01
PIK3R1-209ENST00000520550 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
PIK3R1-209ENST00000520550 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
PIK3R1-209ENST00000520550 FARP1Q9Y4F1 1045 aaPredicted RBP15.05■□□□□ -0
PIK3R1-209ENST00000520550 NPM1P06748 294 aaKnown RBP eCLIP15.03■□□□□ -0
PIK3R1-209ENST00000520550 SPOCK2Q92563 424 aa14.99□□□□□ -0.01
PIK3R1-209ENST00000520550 POTEHQ6S545 545 aa14.93□□□□□ -0.02
PIK3R1-209ENST00000520550 NUBP1P53384 320 aa14.89□□□□□ -0.03
PIK3R1-209ENST00000520550 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
PIK3R1-209ENST00000520550 FAM212AQ96EL1 285 aa14.79□□□□□ -0.04
PIK3R1-209ENST00000520550 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
PIK3R1-209ENST00000520550 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
PIK3R1-209ENST00000520550 GSE1Q14687 1217 aa14.76□□□□□ -0.05
PIK3R1-209ENST00000520550 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
PIK3R1-209ENST00000520550 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
PIK3R1-209ENST00000520550 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
PIK3R1-209ENST00000520550 HAX1O00165 279 aa14.74□□□□□ -0.05
PIK3R1-209ENST00000520550 CIZ1Q9ULV3 898 aaPredicted RBP14.72□□□□□ -0.05
PIK3R1-209ENST00000520550 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms