RNA–Protein interactions for RNA: ENST00000519299.1

CCDC25-203, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-203ENST00000519299 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
CCDC25-203ENST00000519299 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
CCDC25-203ENST00000519299 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
CCDC25-203ENST00000519299 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
CCDC25-203ENST00000519299 FOXD1Q16676 465 aa22.48■■□□□ 1.19
CCDC25-203ENST00000519299 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
CCDC25-203ENST00000519299 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
CCDC25-203ENST00000519299 ADRA2BP18089 450 aa21.46■■□□□ 1.03
CCDC25-203ENST00000519299 PIAS4Q8N2W9 510 aaPredicted RBP21.2■□□□□ 0.98
CCDC25-203ENST00000519299 MSH5O43196 834 aa20.88■□□□□ 0.93
CCDC25-203ENST00000519299 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
CCDC25-203ENST00000519299 PPP4R3CPQ6ZMV5 832 aa19.73■□□□□ 0.75
CCDC25-203ENST00000519299 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
CCDC25-203ENST00000519299 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
CCDC25-203ENST00000519299 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
CCDC25-203ENST00000519299 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
CCDC25-203ENST00000519299 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
CCDC25-203ENST00000519299 KCNA4P22459 653 aa19.04■□□□□ 0.64
CCDC25-203ENST00000519299 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
CCDC25-203ENST00000519299 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
CCDC25-203ENST00000519299 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
CCDC25-203ENST00000519299 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
CCDC25-203ENST00000519299 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
CCDC25-203ENST00000519299 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
CCDC25-203ENST00000519299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
CCDC25-203ENST00000519299 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
CCDC25-203ENST00000519299 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
CCDC25-203ENST00000519299 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
CCDC25-203ENST00000519299 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
CCDC25-203ENST00000519299 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CCDC25-203ENST00000519299 CACNB1Q02641 598 aaPredicted RBP17.52■□□□□ 0.4
CCDC25-203ENST00000519299 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
CCDC25-203ENST00000519299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
CCDC25-203ENST00000519299 ZBTB22O15209 634 aa17.47■□□□□ 0.39
CCDC25-203ENST00000519299 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
CCDC25-203ENST00000519299 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
CCDC25-203ENST00000519299 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
CCDC25-203ENST00000519299 APLP2Q06481 763 aa17.35■□□□□ 0.37
CCDC25-203ENST00000519299 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
CCDC25-203ENST00000519299 CAPN15O75808 1086 aa17.18■□□□□ 0.34
CCDC25-203ENST00000519299 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
CCDC25-203ENST00000519299 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
CCDC25-203ENST00000519299 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
CCDC25-203ENST00000519299 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
CCDC25-203ENST00000519299 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
CCDC25-203ENST00000519299 DSG3P32926 999 aa16.9■□□□□ 0.3
CCDC25-203ENST00000519299 ABCB7O75027 752 aa16.79■□□□□ 0.28
CCDC25-203ENST00000519299 POLA2Q14181 598 aa16.73■□□□□ 0.27
CCDC25-203ENST00000519299 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
CCDC25-203ENST00000519299 FBLN2P98095 1184 aa16.36■□□□□ 0.21
CCDC25-203ENST00000519299 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
CCDC25-203ENST00000519299 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
CCDC25-203ENST00000519299 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
CCDC25-203ENST00000519299 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
CCDC25-203ENST00000519299 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
CCDC25-203ENST00000519299 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
CCDC25-203ENST00000519299 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
CCDC25-203ENST00000519299 AKT1S1Q96B36 256 aa15.92■□□□□ 0.14
CCDC25-203ENST00000519299 SSUH2Q9Y2M2 353 aa15.83■□□□□ 0.12
CCDC25-203ENST00000519299 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
CCDC25-203ENST00000519299 REM2Q8IYK8 340 aaPredicted RBP15.74■□□□□ 0.11
CCDC25-203ENST00000519299 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC25-203ENST00000519299 FKBP8Q14318 412 aa15.67■□□□□ 0.1
CCDC25-203ENST00000519299 SPDYE1Q8NFV5 336 aaPredicted RBP15.59■□□□□ 0.09
CCDC25-203ENST00000519299 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
CCDC25-203ENST00000519299 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
CCDC25-203ENST00000519299 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
CCDC25-203ENST00000519299 PROM2Q8N271 834 aa15.5■□□□□ 0.07
CCDC25-203ENST00000519299 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
CCDC25-203ENST00000519299 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
CCDC25-203ENST00000519299 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCDC25-203ENST00000519299 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
CCDC25-203ENST00000519299 POTEHQ6S545 545 aa15.23■□□□□ 0.03
CCDC25-203ENST00000519299 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
CCDC25-203ENST00000519299 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
CCDC25-203ENST00000519299 CHADLQ6NUI6 762 aa15.11■□□□□ 0.01
CCDC25-203ENST00000519299 CREBZFQ9NS37 354 aa15.07■□□□□ 0
CCDC25-203ENST00000519299 PLEKHG5O94827 1062 aa15.06■□□□□ 0
CCDC25-203ENST00000519299 MIER1Q8N108 512 aa15.05■□□□□ -0
CCDC25-203ENST00000519299 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
CCDC25-203ENST00000519299 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
CCDC25-203ENST00000519299 VASPP50552 380 aaPredicted RBP14.95□□□□□ -0.02
CCDC25-203ENST00000519299 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
CCDC25-203ENST00000519299 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
CCDC25-203ENST00000519299 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
CCDC25-203ENST00000519299 HAX1O00165 279 aa14.87□□□□□ -0.03
CCDC25-203ENST00000519299 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
CCDC25-203ENST00000519299 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
CCDC25-203ENST00000519299 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
CCDC25-203ENST00000519299 IFNLR1Q8IU57 520 aaPredicted RBP14.72□□□□□ -0.05
CCDC25-203ENST00000519299 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
CCDC25-203ENST00000519299 EVX2Q03828 476 aa14.64□□□□□ -0.07
CCDC25-203ENST00000519299 NUBP1P53384 320 aa14.63□□□□□ -0.07
CCDC25-203ENST00000519299 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
CCDC25-203ENST00000519299 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
CCDC25-203ENST00000519299 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
CCDC25-203ENST00000519299 TSPYL2Q9H2G4 693 aaPredicted RBP14.6□□□□□ -0.07
CCDC25-203ENST00000519299 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
CCDC25-203ENST00000519299 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
CCDC25-203ENST00000519299 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms