RNA–Protein interactions for RNA: ENST00000518278.5

LINC00293-201, long intergenic non-protein coding RNA 293, humanhuman

TSL 4

Gene LINC00293, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-201ENST00000518278 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
LINC00293-201ENST00000518278 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
LINC00293-201ENST00000518278 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
LINC00293-201ENST00000518278 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
LINC00293-201ENST00000518278 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
LINC00293-201ENST00000518278 FOXD1Q16676 465 aa15.93■□□□□ 0.14
LINC00293-201ENST00000518278 MSH5O43196 834 aa15.47■□□□□ 0.07
LINC00293-201ENST00000518278 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
LINC00293-201ENST00000518278 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
LINC00293-201ENST00000518278 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
LINC00293-201ENST00000518278 ADRA2BP18089 450 aa13.67□□□□□ -0.22
LINC00293-201ENST00000518278 POTEHQ6S545 545 aa13.37□□□□□ -0.27
LINC00293-201ENST00000518278 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
LINC00293-201ENST00000518278 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
LINC00293-201ENST00000518278 RNF39Q9H2S5 420 aa13.08□□□□□ -0.32
LINC00293-201ENST00000518278 MAPK8IP2Q13387 824 aaPredicted RBP12.97□□□□□ -0.33
LINC00293-201ENST00000518278 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
LINC00293-201ENST00000518278 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
LINC00293-201ENST00000518278 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
LINC00293-201ENST00000518278 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
LINC00293-201ENST00000518278 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
LINC00293-201ENST00000518278 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
LINC00293-201ENST00000518278 DSG3P32926 999 aa11.76□□□□□ -0.53
LINC00293-201ENST00000518278 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
LINC00293-201ENST00000518278 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
LINC00293-201ENST00000518278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00293-201ENST00000518278 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
LINC00293-201ENST00000518278 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
LINC00293-201ENST00000518278 CAPN15O75808 1086 aa11.44□□□□□ -0.58
LINC00293-201ENST00000518278 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
LINC00293-201ENST00000518278 PPP4R3CPQ6ZMV5 832 aa11.35□□□□□ -0.59
LINC00293-201ENST00000518278 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
LINC00293-201ENST00000518278 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
LINC00293-201ENST00000518278 HAX1O00165 279 aa11.1□□□□□ -0.63
LINC00293-201ENST00000518278 LHX8Q68G74 356 aa11.1□□□□□ -0.63
LINC00293-201ENST00000518278 ABCB7O75027 752 aa11.07□□□□□ -0.64
LINC00293-201ENST00000518278 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
LINC00293-201ENST00000518278 TRHP20396 242 aaPredicted RBP10.92□□□□□ -0.66
LINC00293-201ENST00000518278 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
LINC00293-201ENST00000518278 EVX2Q03828 476 aa10.89□□□□□ -0.67
LINC00293-201ENST00000518278 APLP2Q06481 763 aa10.73□□□□□ -0.69
LINC00293-201ENST00000518278 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00293-201ENST00000518278 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
LINC00293-201ENST00000518278 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
LINC00293-201ENST00000518278 GABBR2O75899 941 aa10.57□□□□□ -0.72
LINC00293-201ENST00000518278 POTEMA6NI47 508 aa10.54□□□□□ -0.72
LINC00293-201ENST00000518278 PITPNM1O00562 1244 aa10.51□□□□□ -0.73
LINC00293-201ENST00000518278 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
LINC00293-201ENST00000518278 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
LINC00293-201ENST00000518278 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
LINC00293-201ENST00000518278 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
LINC00293-201ENST00000518278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
LINC00293-201ENST00000518278 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
LINC00293-201ENST00000518278 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
LINC00293-201ENST00000518278 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
LINC00293-201ENST00000518278 POLA2Q14181 598 aa10.33□□□□□ -0.76
LINC00293-201ENST00000518278 SAMD1Q6SPF0 538 aaPredicted RBP10.29□□□□□ -0.76
LINC00293-201ENST00000518278 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
LINC00293-201ENST00000518278 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
LINC00293-201ENST00000518278 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
LINC00293-201ENST00000518278 OSCARQ8IYS5 282 aa10.1□□□□□ -0.79
LINC00293-201ENST00000518278 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
LINC00293-201ENST00000518278 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
LINC00293-201ENST00000518278 CLCN6P51797 869 aa9.98□□□□□ -0.81
LINC00293-201ENST00000518278 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
LINC00293-201ENST00000518278 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
LINC00293-201ENST00000518278 CD44P16070 742 aaKnown RBP9.8□□□□□ -0.84
LINC00293-201ENST00000518278 SPDYE1Q8NFV5 336 aaPredicted RBP9.79□□□□□ -0.84
LINC00293-201ENST00000518278 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
LINC00293-201ENST00000518278 CHADLQ6NUI6 762 aa9.76□□□□□ -0.85
LINC00293-201ENST00000518278 CDAN1Q8IWY9 1227 aa9.75□□□□□ -0.85
LINC00293-201ENST00000518278 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
LINC00293-201ENST00000518278 MMRN1Q13201 1228 aa9.69□□□□□ -0.86
LINC00293-201ENST00000518278 SPDYE2BA6NHP3 402 aa9.64□□□□□ -0.87
LINC00293-201ENST00000518278 SPDYE6P0CI01 402 aa9.64□□□□□ -0.87
LINC00293-201ENST00000518278 SPDYE2Q495Y8 402 aa9.64□□□□□ -0.87
LINC00293-201ENST00000518278 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
LINC00293-201ENST00000518278 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
LINC00293-201ENST00000518278 POTEJP0CG39 1038 aa9.62□□□□□ -0.87
LINC00293-201ENST00000518278 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
LINC00293-201ENST00000518278 GALR2O43603 387 aaPredicted RBP9.57□□□□□ -0.88
LINC00293-201ENST00000518278 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
LINC00293-201ENST00000518278 PELP1Q8IZL8 1130 aaKnown RBP9.51□□□□□ -0.89
LINC00293-201ENST00000518278 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
LINC00293-201ENST00000518278 ATF5Q9Y2D1 282 aaPredicted RBP9.49□□□□□ -0.89
LINC00293-201ENST00000518278 METRNQ9UJH8 293 aa9.47□□□□□ -0.89
LINC00293-201ENST00000518278 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
LINC00293-201ENST00000518278 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
LINC00293-201ENST00000518278 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
LINC00293-201ENST00000518278 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
LINC00293-201ENST00000518278 C7P10643 843 aa9.38□□□□□ -0.91
LINC00293-201ENST00000518278 SLC39A7Q92504 469 aa9.38□□□□□ -0.91
LINC00293-201ENST00000518278 ASTLQ6HA08 431 aaPredicted RBP9.31□□□□□ -0.92
LINC00293-201ENST00000518278 ST18O60284 1047 aa9.24□□□□□ -0.93
LINC00293-201ENST00000518278 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
LINC00293-201ENST00000518278 ATMINO43313 823 aaPredicted RBP9.23□□□□□ -0.93
LINC00293-201ENST00000518278 FBLN2P98095 1184 aa9.2□□□□□ -0.94
LINC00293-201ENST00000518278 PHF12Q96QT6 1004 aa9.19□□□□□ -0.94
LINC00293-201ENST00000518278 POTEFA5A3E0 1075 aa9.12□□□□□ -0.95
LINC00293-201ENST00000518278 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms