RNA–Protein interactions for RNA: ENST00000515678.5

ABCE1-210, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 2

Gene ABCE1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-210ENST00000515678 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
ABCE1-210ENST00000515678 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
ABCE1-210ENST00000515678 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
ABCE1-210ENST00000515678 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
ABCE1-210ENST00000515678 POTEDQ86YR6 584 aa17.65■□□□□ 0.42
ABCE1-210ENST00000515678 FOXD1Q16676 465 aa17.62■□□□□ 0.41
ABCE1-210ENST00000515678 MSH5O43196 834 aa16.85■□□□□ 0.29
ABCE1-210ENST00000515678 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
ABCE1-210ENST00000515678 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
ABCE1-210ENST00000515678 ADRA2BP18089 450 aa15.75■□□□□ 0.11
ABCE1-210ENST00000515678 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
ABCE1-210ENST00000515678 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
ABCE1-210ENST00000515678 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
ABCE1-210ENST00000515678 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
ABCE1-210ENST00000515678 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
ABCE1-210ENST00000515678 RNF39Q9H2S5 420 aa14.28□□□□□ -0.12
ABCE1-210ENST00000515678 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
ABCE1-210ENST00000515678 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
ABCE1-210ENST00000515678 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
ABCE1-210ENST00000515678 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
ABCE1-210ENST00000515678 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
ABCE1-210ENST00000515678 POTEHQ6S545 545 aa13.69□□□□□ -0.22
ABCE1-210ENST00000515678 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
ABCE1-210ENST00000515678 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
ABCE1-210ENST00000515678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
ABCE1-210ENST00000515678 DSG3P32926 999 aa13.1□□□□□ -0.31
ABCE1-210ENST00000515678 CAPN15O75808 1086 aa12.95□□□□□ -0.34
ABCE1-210ENST00000515678 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
ABCE1-210ENST00000515678 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
ABCE1-210ENST00000515678 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
ABCE1-210ENST00000515678 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
ABCE1-210ENST00000515678 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
ABCE1-210ENST00000515678 APLP2Q06481 763 aa12.58□□□□□ -0.4
ABCE1-210ENST00000515678 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
ABCE1-210ENST00000515678 ABCB7O75027 752 aa12.55□□□□□ -0.4
ABCE1-210ENST00000515678 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
ABCE1-210ENST00000515678 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
ABCE1-210ENST00000515678 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
ABCE1-210ENST00000515678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
ABCE1-210ENST00000515678 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
ABCE1-210ENST00000515678 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
ABCE1-210ENST00000515678 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
ABCE1-210ENST00000515678 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
ABCE1-210ENST00000515678 POLA2Q14181 598 aa12.07□□□□□ -0.48
ABCE1-210ENST00000515678 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
ABCE1-210ENST00000515678 HAX1O00165 279 aa12.03□□□□□ -0.48
ABCE1-210ENST00000515678 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
ABCE1-210ENST00000515678 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
ABCE1-210ENST00000515678 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
ABCE1-210ENST00000515678 PITPNM1O00562 1244 aa11.83□□□□□ -0.52
ABCE1-210ENST00000515678 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
ABCE1-210ENST00000515678 EVX2Q03828 476 aa11.8□□□□□ -0.52
ABCE1-210ENST00000515678 KCNA4P22459 653 aa11.78□□□□□ -0.52
ABCE1-210ENST00000515678 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
ABCE1-210ENST00000515678 LHX8Q68G74 356 aa11.69□□□□□ -0.54
ABCE1-210ENST00000515678 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
ABCE1-210ENST00000515678 GABBR2O75899 941 aa11.54□□□□□ -0.56
ABCE1-210ENST00000515678 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
ABCE1-210ENST00000515678 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
ABCE1-210ENST00000515678 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
ABCE1-210ENST00000515678 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
ABCE1-210ENST00000515678 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
ABCE1-210ENST00000515678 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
ABCE1-210ENST00000515678 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
ABCE1-210ENST00000515678 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
ABCE1-210ENST00000515678 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
ABCE1-210ENST00000515678 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
ABCE1-210ENST00000515678 CLCN6P51797 869 aa11.23□□□□□ -0.61
ABCE1-210ENST00000515678 FBLN2P98095 1184 aa11.2□□□□□ -0.62
ABCE1-210ENST00000515678 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
ABCE1-210ENST00000515678 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
ABCE1-210ENST00000515678 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
ABCE1-210ENST00000515678 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
ABCE1-210ENST00000515678 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
ABCE1-210ENST00000515678 ATXN8OSP0DMR3 200 aa11.07□□□□□ -0.64
ABCE1-210ENST00000515678 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
ABCE1-210ENST00000515678 POTEMA6NI47 508 aa11.04□□□□□ -0.64
ABCE1-210ENST00000515678 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
ABCE1-210ENST00000515678 PCDH10Q9P2E7 1040 aa11□□□□□ -0.65
ABCE1-210ENST00000515678 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
ABCE1-210ENST00000515678 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
ABCE1-210ENST00000515678 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
ABCE1-210ENST00000515678 POTEGQ6S5H5 508 aa10.98□□□□□ -0.65
ABCE1-210ENST00000515678 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
ABCE1-210ENST00000515678 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
ABCE1-210ENST00000515678 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
ABCE1-210ENST00000515678 ZRANB1Q9UGI0 708 aa10.81□□□□□ -0.68
ABCE1-210ENST00000515678 ZBTB22O15209 634 aa10.8□□□□□ -0.68
ABCE1-210ENST00000515678 GALR2O43603 387 aaPredicted RBP10.8□□□□□ -0.68
ABCE1-210ENST00000515678 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
ABCE1-210ENST00000515678 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
ABCE1-210ENST00000515678 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
ABCE1-210ENST00000515678 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
ABCE1-210ENST00000515678 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
ABCE1-210ENST00000515678 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
ABCE1-210ENST00000515678 POTEJP0CG39 1038 aa10.6□□□□□ -0.71
ABCE1-210ENST00000515678 C7P10643 843 aa10.59□□□□□ -0.71
ABCE1-210ENST00000515678 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
ABCE1-210ENST00000515678 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
ABCE1-210ENST00000515678 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms