RNA–Protein interactions for RNA: ENST00000515373.1

KCNIP4-209, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 5

Gene KCNIP4, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-209ENST00000515373 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
KCNIP4-209ENST00000515373 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
KCNIP4-209ENST00000515373 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
KCNIP4-209ENST00000515373 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
KCNIP4-209ENST00000515373 FOXD1Q16676 465 aa16.27■□□□□ 0.2
KCNIP4-209ENST00000515373 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
KCNIP4-209ENST00000515373 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
KCNIP4-209ENST00000515373 ADRA2BP18089 450 aa15.6■□□□□ 0.09
KCNIP4-209ENST00000515373 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
KCNIP4-209ENST00000515373 MSH5O43196 834 aa14.97□□□□□ -0.01
KCNIP4-209ENST00000515373 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
KCNIP4-209ENST00000515373 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
KCNIP4-209ENST00000515373 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
KCNIP4-209ENST00000515373 KCNA4P22459 653 aa13.97□□□□□ -0.17
KCNIP4-209ENST00000515373 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
KCNIP4-209ENST00000515373 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
KCNIP4-209ENST00000515373 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
KCNIP4-209ENST00000515373 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
KCNIP4-209ENST00000515373 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
KCNIP4-209ENST00000515373 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
KCNIP4-209ENST00000515373 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
KCNIP4-209ENST00000515373 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
KCNIP4-209ENST00000515373 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
KCNIP4-209ENST00000515373 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
KCNIP4-209ENST00000515373 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
KCNIP4-209ENST00000515373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
KCNIP4-209ENST00000515373 ZBTB22O15209 634 aa12.89□□□□□ -0.35
KCNIP4-209ENST00000515373 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
KCNIP4-209ENST00000515373 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
KCNIP4-209ENST00000515373 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
KCNIP4-209ENST00000515373 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
KCNIP4-209ENST00000515373 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
KCNIP4-209ENST00000515373 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
KCNIP4-209ENST00000515373 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
KCNIP4-209ENST00000515373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
KCNIP4-209ENST00000515373 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
KCNIP4-209ENST00000515373 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
KCNIP4-209ENST00000515373 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
KCNIP4-209ENST00000515373 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
KCNIP4-209ENST00000515373 APLP2Q06481 763 aa12.41□□□□□ -0.42
KCNIP4-209ENST00000515373 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
KCNIP4-209ENST00000515373 CAPN15O75808 1086 aa12.38□□□□□ -0.43
KCNIP4-209ENST00000515373 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
KCNIP4-209ENST00000515373 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
KCNIP4-209ENST00000515373 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
KCNIP4-209ENST00000515373 DSG3P32926 999 aa12.22□□□□□ -0.45
KCNIP4-209ENST00000515373 ABCB7O75027 752 aa12.16□□□□□ -0.46
KCNIP4-209ENST00000515373 POLA2Q14181 598 aa12.12□□□□□ -0.47
KCNIP4-209ENST00000515373 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
KCNIP4-209ENST00000515373 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
KCNIP4-209ENST00000515373 FBLN2P98095 1184 aa11.8□□□□□ -0.52
KCNIP4-209ENST00000515373 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
KCNIP4-209ENST00000515373 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
KCNIP4-209ENST00000515373 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
KCNIP4-209ENST00000515373 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
KCNIP4-209ENST00000515373 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
KCNIP4-209ENST00000515373 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
KCNIP4-209ENST00000515373 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
KCNIP4-209ENST00000515373 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
KCNIP4-209ENST00000515373 FKBP8Q14318 412 aa11.49□□□□□ -0.57
KCNIP4-209ENST00000515373 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
KCNIP4-209ENST00000515373 PABPN1Q86U42 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
KCNIP4-209ENST00000515373 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
KCNIP4-209ENST00000515373 PROM2Q8N271 834 aa11.36□□□□□ -0.59
KCNIP4-209ENST00000515373 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
KCNIP4-209ENST00000515373 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
KCNIP4-209ENST00000515373 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
KCNIP4-209ENST00000515373 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
KCNIP4-209ENST00000515373 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
KCNIP4-209ENST00000515373 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
KCNIP4-209ENST00000515373 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
KCNIP4-209ENST00000515373 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
KCNIP4-209ENST00000515373 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
KCNIP4-209ENST00000515373 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
KCNIP4-209ENST00000515373 CREBZFQ9NS37 354 aa10.96□□□□□ -0.65
KCNIP4-209ENST00000515373 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
KCNIP4-209ENST00000515373 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
KCNIP4-209ENST00000515373 MIER1Q8N108 512 aa10.92□□□□□ -0.66
KCNIP4-209ENST00000515373 POTEHQ6S545 545 aa10.88□□□□□ -0.67
KCNIP4-209ENST00000515373 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
KCNIP4-209ENST00000515373 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
KCNIP4-209ENST00000515373 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
KCNIP4-209ENST00000515373 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
KCNIP4-209ENST00000515373 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
KCNIP4-209ENST00000515373 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
KCNIP4-209ENST00000515373 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
KCNIP4-209ENST00000515373 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
KCNIP4-209ENST00000515373 NUBP1P53384 320 aa10.68□□□□□ -0.7
KCNIP4-209ENST00000515373 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
KCNIP4-209ENST00000515373 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
KCNIP4-209ENST00000515373 HAX1O00165 279 aa10.65□□□□□ -0.7
KCNIP4-209ENST00000515373 SPOCK2Q92563 424 aa10.65□□□□□ -0.7
KCNIP4-209ENST00000515373 EVX2Q03828 476 aa10.64□□□□□ -0.71
KCNIP4-209ENST00000515373 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
KCNIP4-209ENST00000515373 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
KCNIP4-209ENST00000515373 ZRANB1Q9UGI0 708 aa10.56□□□□□ -0.72
KCNIP4-209ENST00000515373 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
KCNIP4-209ENST00000515373 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
KCNIP4-209ENST00000515373 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
KCNIP4-209ENST00000515373 CCDC61Q9Y6R9 512 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms