RNA–Protein interactions for RNA: ENST00000513108.1

PROM1-214, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-214ENST00000513108 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
PROM1-214ENST00000513108 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
PROM1-214ENST00000513108 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
PROM1-214ENST00000513108 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
PROM1-214ENST00000513108 FOXD1Q16676 465 aa17.68■□□□□ 0.42
PROM1-214ENST00000513108 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
PROM1-214ENST00000513108 ADRA2BP18089 450 aa16.87■□□□□ 0.29
PROM1-214ENST00000513108 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
PROM1-214ENST00000513108 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
PROM1-214ENST00000513108 MSH5O43196 834 aa16.45■□□□□ 0.22
PROM1-214ENST00000513108 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
PROM1-214ENST00000513108 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
PROM1-214ENST00000513108 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
PROM1-214ENST00000513108 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
PROM1-214ENST00000513108 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
PROM1-214ENST00000513108 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
PROM1-214ENST00000513108 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
PROM1-214ENST00000513108 KCNA4P22459 653 aa14.86□□□□□ -0.03
PROM1-214ENST00000513108 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
PROM1-214ENST00000513108 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
PROM1-214ENST00000513108 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
PROM1-214ENST00000513108 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
PROM1-214ENST00000513108 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
PROM1-214ENST00000513108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
PROM1-214ENST00000513108 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
PROM1-214ENST00000513108 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
PROM1-214ENST00000513108 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
PROM1-214ENST00000513108 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
PROM1-214ENST00000513108 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
PROM1-214ENST00000513108 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
PROM1-214ENST00000513108 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
PROM1-214ENST00000513108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
PROM1-214ENST00000513108 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
PROM1-214ENST00000513108 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
PROM1-214ENST00000513108 APLP2Q06481 763 aa13.63□□□□□ -0.23
PROM1-214ENST00000513108 ZBTB22O15209 634 aa13.61□□□□□ -0.23
PROM1-214ENST00000513108 SAMD1Q6SPF0 538 aaPredicted RBP13.61□□□□□ -0.23
PROM1-214ENST00000513108 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
PROM1-214ENST00000513108 CAPN15O75808 1086 aa13.56□□□□□ -0.24
PROM1-214ENST00000513108 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
PROM1-214ENST00000513108 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
PROM1-214ENST00000513108 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
PROM1-214ENST00000513108 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
PROM1-214ENST00000513108 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
PROM1-214ENST00000513108 DSG3P32926 999 aa13.28□□□□□ -0.28
PROM1-214ENST00000513108 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
PROM1-214ENST00000513108 ABCB7O75027 752 aa13.24□□□□□ -0.29
PROM1-214ENST00000513108 POLA2Q14181 598 aa13.15□□□□□ -0.3
PROM1-214ENST00000513108 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
PROM1-214ENST00000513108 FBLN2P98095 1184 aa12.84□□□□□ -0.35
PROM1-214ENST00000513108 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
PROM1-214ENST00000513108 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
PROM1-214ENST00000513108 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
PROM1-214ENST00000513108 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
PROM1-214ENST00000513108 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
PROM1-214ENST00000513108 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
PROM1-214ENST00000513108 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
PROM1-214ENST00000513108 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
PROM1-214ENST00000513108 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
PROM1-214ENST00000513108 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
PROM1-214ENST00000513108 SSUH2Q9Y2M2 353 aa12.37□□□□□ -0.43
PROM1-214ENST00000513108 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
PROM1-214ENST00000513108 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
PROM1-214ENST00000513108 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
PROM1-214ENST00000513108 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
PROM1-214ENST00000513108 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
PROM1-214ENST00000513108 FKBP8Q14318 412 aa12.22□□□□□ -0.45
PROM1-214ENST00000513108 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
PROM1-214ENST00000513108 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
PROM1-214ENST00000513108 POTEHQ6S545 545 aa12.07□□□□□ -0.48
PROM1-214ENST00000513108 PROM2Q8N271 834 aa12.03□□□□□ -0.48
PROM1-214ENST00000513108 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
PROM1-214ENST00000513108 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
PROM1-214ENST00000513108 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
PROM1-214ENST00000513108 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
PROM1-214ENST00000513108 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
PROM1-214ENST00000513108 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
PROM1-214ENST00000513108 MIER1Q8N108 512 aa11.82□□□□□ -0.52
PROM1-214ENST00000513108 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
PROM1-214ENST00000513108 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
PROM1-214ENST00000513108 HAX1O00165 279 aa11.78□□□□□ -0.52
PROM1-214ENST00000513108 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
PROM1-214ENST00000513108 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
PROM1-214ENST00000513108 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
PROM1-214ENST00000513108 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
PROM1-214ENST00000513108 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
PROM1-214ENST00000513108 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
PROM1-214ENST00000513108 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
PROM1-214ENST00000513108 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
PROM1-214ENST00000513108 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
PROM1-214ENST00000513108 EVX2Q03828 476 aa11.54□□□□□ -0.56
PROM1-214ENST00000513108 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
PROM1-214ENST00000513108 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
PROM1-214ENST00000513108 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
PROM1-214ENST00000513108 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
PROM1-214ENST00000513108 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
PROM1-214ENST00000513108 NUBP1P53384 320 aa11.42□□□□□ -0.58
PROM1-214ENST00000513108 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
PROM1-214ENST00000513108 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
PROM1-214ENST00000513108 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms