RNA–Protein interactions for RNA: ENST00000512362.5

PIK3R4-206, Transcript of phosphoinositide-3-kinase regulatory subunit 4, humanhuman

TSL 2

Gene PIK3R4, Length 728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R4-206ENST00000512362 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
PIK3R4-206ENST00000512362 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
PIK3R4-206ENST00000512362 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
PIK3R4-206ENST00000512362 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
PIK3R4-206ENST00000512362 FOXD1Q16676 465 aa20.54■□□□□ 0.88
PIK3R4-206ENST00000512362 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
PIK3R4-206ENST00000512362 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
PIK3R4-206ENST00000512362 ADRA2BP18089 450 aa19.58■□□□□ 0.72
PIK3R4-206ENST00000512362 PIAS4Q8N2W9 510 aaPredicted RBP19.31■□□□□ 0.68
PIK3R4-206ENST00000512362 MSH5O43196 834 aa19.06■□□□□ 0.64
PIK3R4-206ENST00000512362 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
PIK3R4-206ENST00000512362 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
PIK3R4-206ENST00000512362 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
PIK3R4-206ENST00000512362 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
PIK3R4-206ENST00000512362 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
PIK3R4-206ENST00000512362 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
PIK3R4-206ENST00000512362 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
PIK3R4-206ENST00000512362 KCNA4P22459 653 aa17.36■□□□□ 0.37
PIK3R4-206ENST00000512362 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
PIK3R4-206ENST00000512362 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
PIK3R4-206ENST00000512362 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
PIK3R4-206ENST00000512362 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
PIK3R4-206ENST00000512362 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
PIK3R4-206ENST00000512362 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
PIK3R4-206ENST00000512362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
PIK3R4-206ENST00000512362 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
PIK3R4-206ENST00000512362 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
PIK3R4-206ENST00000512362 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
PIK3R4-206ENST00000512362 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
PIK3R4-206ENST00000512362 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
PIK3R4-206ENST00000512362 ZBTB22O15209 634 aa15.96■□□□□ 0.15
PIK3R4-206ENST00000512362 CACNB1Q02641 598 aaPredicted RBP15.95■□□□□ 0.14
PIK3R4-206ENST00000512362 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
PIK3R4-206ENST00000512362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
PIK3R4-206ENST00000512362 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
PIK3R4-206ENST00000512362 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
PIK3R4-206ENST00000512362 APLP2Q06481 763 aa15.78■□□□□ 0.12
PIK3R4-206ENST00000512362 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
PIK3R4-206ENST00000512362 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
PIK3R4-206ENST00000512362 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
PIK3R4-206ENST00000512362 CAPN15O75808 1086 aa15.61■□□□□ 0.09
PIK3R4-206ENST00000512362 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
PIK3R4-206ENST00000512362 ZNF219Q9P2Y4 722 aaPredicted RBP15.56■□□□□ 0.08
PIK3R4-206ENST00000512362 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
PIK3R4-206ENST00000512362 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
PIK3R4-206ENST00000512362 DSG3P32926 999 aa15.44■□□□□ 0.06
PIK3R4-206ENST00000512362 ABCB7O75027 752 aa15.26■□□□□ 0.03
PIK3R4-206ENST00000512362 POLA2Q14181 598 aa15.25■□□□□ 0.03
PIK3R4-206ENST00000512362 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
PIK3R4-206ENST00000512362 FBLN2P98095 1184 aa14.87□□□□□ -0.03
PIK3R4-206ENST00000512362 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
PIK3R4-206ENST00000512362 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
PIK3R4-206ENST00000512362 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
PIK3R4-206ENST00000512362 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
PIK3R4-206ENST00000512362 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
PIK3R4-206ENST00000512362 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
PIK3R4-206ENST00000512362 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
PIK3R4-206ENST00000512362 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
PIK3R4-206ENST00000512362 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
PIK3R4-206ENST00000512362 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
PIK3R4-206ENST00000512362 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
PIK3R4-206ENST00000512362 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
PIK3R4-206ENST00000512362 FKBP8Q14318 412 aa14.22□□□□□ -0.13
PIK3R4-206ENST00000512362 PROM2Q8N271 834 aa14.21□□□□□ -0.13
PIK3R4-206ENST00000512362 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
PIK3R4-206ENST00000512362 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
PIK3R4-206ENST00000512362 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
PIK3R4-206ENST00000512362 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
PIK3R4-206ENST00000512362 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
PIK3R4-206ENST00000512362 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
PIK3R4-206ENST00000512362 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
PIK3R4-206ENST00000512362 PIP4P2Q8N4L2 257 aa13.93□□□□□ -0.18
PIK3R4-206ENST00000512362 POTEHQ6S545 545 aa13.9□□□□□ -0.18
PIK3R4-206ENST00000512362 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
PIK3R4-206ENST00000512362 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
PIK3R4-206ENST00000512362 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
PIK3R4-206ENST00000512362 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
PIK3R4-206ENST00000512362 MIER1Q8N108 512 aa13.67□□□□□ -0.22
PIK3R4-206ENST00000512362 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
PIK3R4-206ENST00000512362 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
PIK3R4-206ENST00000512362 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
PIK3R4-206ENST00000512362 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
PIK3R4-206ENST00000512362 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
PIK3R4-206ENST00000512362 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
PIK3R4-206ENST00000512362 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
PIK3R4-206ENST00000512362 HAX1O00165 279 aa13.52□□□□□ -0.25
PIK3R4-206ENST00000512362 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
PIK3R4-206ENST00000512362 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
PIK3R4-206ENST00000512362 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
PIK3R4-206ENST00000512362 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
PIK3R4-206ENST00000512362 EVX2Q03828 476 aa13.38□□□□□ -0.27
PIK3R4-206ENST00000512362 NUBP1P53384 320 aa13.36□□□□□ -0.27
PIK3R4-206ENST00000512362 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
PIK3R4-206ENST00000512362 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
PIK3R4-206ENST00000512362 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
PIK3R4-206ENST00000512362 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
PIK3R4-206ENST00000512362 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
PIK3R4-206ENST00000512362 CLCN6P51797 869 aa13.27□□□□□ -0.29
PIK3R4-206ENST00000512362 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
PIK3R4-206ENST00000512362 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms