RNA–Protein interactions for RNA: ENST00000511233.5

SLC38A9-216, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 1,399 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-216ENST00000511233 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
SLC38A9-216ENST00000511233 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
SLC38A9-216ENST00000511233 SENP3Q9H4L4 574 aaPredicted RBP23.4■■□□□ 1.34
SLC38A9-216ENST00000511233 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
SLC38A9-216ENST00000511233 FOXD1Q16676 465 aa21.92■■□□□ 1.1
SLC38A9-216ENST00000511233 POTEDQ86YR6 584 aa21.74■■□□□ 1.07
SLC38A9-216ENST00000511233 MSH5O43196 834 aa20.82■□□□□ 0.92
SLC38A9-216ENST00000511233 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
SLC38A9-216ENST00000511233 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
SLC38A9-216ENST00000511233 ADRA2BP18089 450 aa19.8■□□□□ 0.76
SLC38A9-216ENST00000511233 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
SLC38A9-216ENST00000511233 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
SLC38A9-216ENST00000511233 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
SLC38A9-216ENST00000511233 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
SLC38A9-216ENST00000511233 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
SLC38A9-216ENST00000511233 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
SLC38A9-216ENST00000511233 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
SLC38A9-216ENST00000511233 HOXD11P31277 338 aaPredicted RBP17.38■□□□□ 0.37
SLC38A9-216ENST00000511233 C1QBPQ07021 282 aaKnown RBP17.37■□□□□ 0.37
SLC38A9-216ENST00000511233 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
SLC38A9-216ENST00000511233 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
SLC38A9-216ENST00000511233 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
SLC38A9-216ENST00000511233 POTEHQ6S545 545 aa16.89■□□□□ 0.29
SLC38A9-216ENST00000511233 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
SLC38A9-216ENST00000511233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
SLC38A9-216ENST00000511233 CAPN15O75808 1086 aa16.3■□□□□ 0.2
SLC38A9-216ENST00000511233 DSG3P32926 999 aa16.29■□□□□ 0.2
SLC38A9-216ENST00000511233 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
SLC38A9-216ENST00000511233 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
SLC38A9-216ENST00000511233 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
SLC38A9-216ENST00000511233 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
SLC38A9-216ENST00000511233 ABCB7O75027 752 aa15.86■□□□□ 0.13
SLC38A9-216ENST00000511233 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
SLC38A9-216ENST00000511233 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
SLC38A9-216ENST00000511233 APLP2Q06481 763 aa15.66■□□□□ 0.1
SLC38A9-216ENST00000511233 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
SLC38A9-216ENST00000511233 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
SLC38A9-216ENST00000511233 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
SLC38A9-216ENST00000511233 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
SLC38A9-216ENST00000511233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
SLC38A9-216ENST00000511233 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
SLC38A9-216ENST00000511233 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
SLC38A9-216ENST00000511233 POLA2Q14181 598 aa15.18■□□□□ 0.02
SLC38A9-216ENST00000511233 HAX1O00165 279 aa15.06■□□□□ 0
SLC38A9-216ENST00000511233 PIP4P2Q8N4L2 257 aa15.03■□□□□ -0
SLC38A9-216ENST00000511233 AKT1S1Q96B36 256 aa15.03■□□□□ -0
SLC38A9-216ENST00000511233 KCNA4P22459 653 aa15.01□□□□□ -0.01
SLC38A9-216ENST00000511233 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
SLC38A9-216ENST00000511233 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
SLC38A9-216ENST00000511233 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
SLC38A9-216ENST00000511233 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
SLC38A9-216ENST00000511233 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
SLC38A9-216ENST00000511233 EVX2Q03828 476 aa14.73□□□□□ -0.05
SLC38A9-216ENST00000511233 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
SLC38A9-216ENST00000511233 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
SLC38A9-216ENST00000511233 LHX8Q68G74 356 aa14.49□□□□□ -0.09
SLC38A9-216ENST00000511233 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
SLC38A9-216ENST00000511233 PLSCR2Q9NRY7 297 aa14.37□□□□□ -0.11
SLC38A9-216ENST00000511233 GABBR2O75899 941 aa14.36□□□□□ -0.11
SLC38A9-216ENST00000511233 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
SLC38A9-216ENST00000511233 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
SLC38A9-216ENST00000511233 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
SLC38A9-216ENST00000511233 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
SLC38A9-216ENST00000511233 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
SLC38A9-216ENST00000511233 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
SLC38A9-216ENST00000511233 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
SLC38A9-216ENST00000511233 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
SLC38A9-216ENST00000511233 FBLN2P98095 1184 aa14.1□□□□□ -0.15
SLC38A9-216ENST00000511233 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
SLC38A9-216ENST00000511233 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
SLC38A9-216ENST00000511233 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
SLC38A9-216ENST00000511233 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
SLC38A9-216ENST00000511233 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
SLC38A9-216ENST00000511233 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
SLC38A9-216ENST00000511233 DCBLD2Q96PD2 775 aa13.87□□□□□ -0.19
SLC38A9-216ENST00000511233 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.19
SLC38A9-216ENST00000511233 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
SLC38A9-216ENST00000511233 ZBTB22O15209 634 aa13.76□□□□□ -0.21
SLC38A9-216ENST00000511233 CLCN6P51797 869 aa13.76□□□□□ -0.21
SLC38A9-216ENST00000511233 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
SLC38A9-216ENST00000511233 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
SLC38A9-216ENST00000511233 POTEMA6NI47 508 aa13.71□□□□□ -0.22
SLC38A9-216ENST00000511233 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
SLC38A9-216ENST00000511233 POTEGQ6S5H5 508 aa13.64□□□□□ -0.23
SLC38A9-216ENST00000511233 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
SLC38A9-216ENST00000511233 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
SLC38A9-216ENST00000511233 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
SLC38A9-216ENST00000511233 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
SLC38A9-216ENST00000511233 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
SLC38A9-216ENST00000511233 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
SLC38A9-216ENST00000511233 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.27
SLC38A9-216ENST00000511233 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
SLC38A9-216ENST00000511233 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
SLC38A9-216ENST00000511233 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
SLC38A9-216ENST00000511233 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
SLC38A9-216ENST00000511233 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
SLC38A9-216ENST00000511233 MAMSTRQ6ZN01 415 aa13.21□□□□□ -0.29
SLC38A9-216ENST00000511233 LCE2DQ5TA82 110 aaPredicted RBP13.2□□□□□ -0.3
SLC38A9-216ENST00000511233 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
SLC38A9-216ENST00000511233 C7P10643 843 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms