RNA–Protein interactions for RNA: ENST00000510372.5

SNX2-209, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 1,412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-209ENST00000510372 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
SNX2-209ENST00000510372 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.94
SNX2-209ENST00000510372 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
SNX2-209ENST00000510372 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
SNX2-209ENST00000510372 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
SNX2-209ENST00000510372 FOXD1Q16676 465 aa16.9■□□□□ 0.3
SNX2-209ENST00000510372 ADRA2BP18089 450 aa16.26■□□□□ 0.19
SNX2-209ENST00000510372 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
SNX2-209ENST00000510372 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
SNX2-209ENST00000510372 POTEDQ86YR6 584 aa15.77■□□□□ 0.11
SNX2-209ENST00000510372 MSH5O43196 834 aa15.6■□□□□ 0.09
SNX2-209ENST00000510372 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
SNX2-209ENST00000510372 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
SNX2-209ENST00000510372 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.04
SNX2-209ENST00000510372 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.07
SNX2-209ENST00000510372 KCNA4P22459 653 aa14.58□□□□□ -0.08
SNX2-209ENST00000510372 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
SNX2-209ENST00000510372 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
SNX2-209ENST00000510372 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.11
SNX2-209ENST00000510372 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
SNX2-209ENST00000510372 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
SNX2-209ENST00000510372 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.16
SNX2-209ENST00000510372 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
SNX2-209ENST00000510372 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
SNX2-209ENST00000510372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.231e-7■□□□□ 10.1
SNX2-209ENST00000510372 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
SNX2-209ENST00000510372 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
SNX2-209ENST00000510372 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
SNX2-209ENST00000510372 ZBTB22O15209 634 aa13.39□□□□□ -0.27
SNX2-209ENST00000510372 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
SNX2-209ENST00000510372 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
SNX2-209ENST00000510372 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
SNX2-209ENST00000510372 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
SNX2-209ENST00000510372 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
SNX2-209ENST00000510372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
SNX2-209ENST00000510372 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
SNX2-209ENST00000510372 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
SNX2-209ENST00000510372 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
SNX2-209ENST00000510372 APLP2Q06481 763 aa13.05□□□□□ -0.32
SNX2-209ENST00000510372 CAPN15O75808 1086 aa12.99□□□□□ -0.33
SNX2-209ENST00000510372 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
SNX2-209ENST00000510372 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
SNX2-209ENST00000510372 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
SNX2-209ENST00000510372 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
SNX2-209ENST00000510372 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
SNX2-209ENST00000510372 ABCB7O75027 752 aa12.73□□□□□ -0.37
SNX2-209ENST00000510372 DSG3P32926 999 aa12.71□□□□□ -0.38
SNX2-209ENST00000510372 POLA2Q14181 598 aa12.67□□□□□ -0.38
SNX2-209ENST00000510372 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
SNX2-209ENST00000510372 FBLN2P98095 1184 aa12.41□□□□□ -0.42
SNX2-209ENST00000510372 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
SNX2-209ENST00000510372 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
SNX2-209ENST00000510372 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
SNX2-209ENST00000510372 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
SNX2-209ENST00000510372 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
SNX2-209ENST00000510372 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
SNX2-209ENST00000510372 FKBP8Q14318 412 aa12.08□□□□□ -0.48
SNX2-209ENST00000510372 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
SNX2-209ENST00000510372 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
SNX2-209ENST00000510372 POTEHQ6S545 545 aa12.05□□□□□ -0.48
SNX2-209ENST00000510372 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
SNX2-209ENST00000510372 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
SNX2-209ENST00000510372 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX2-209ENST00000510372 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
SNX2-209ENST00000510372 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.52
SNX2-209ENST00000510372 PROM2Q8N271 834 aa11.77□□□□□ -0.53
SNX2-209ENST00000510372 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
SNX2-209ENST00000510372 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
SNX2-209ENST00000510372 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
SNX2-209ENST00000510372 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
SNX2-209ENST00000510372 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
SNX2-209ENST00000510372 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
SNX2-209ENST00000510372 MIER1Q8N108 512 aa11.51□□□□□ -0.57
SNX2-209ENST00000510372 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNX2-209ENST00000510372 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
SNX2-209ENST00000510372 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
SNX2-209ENST00000510372 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
SNX2-209ENST00000510372 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
SNX2-209ENST00000510372 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
SNX2-209ENST00000510372 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
SNX2-209ENST00000510372 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
SNX2-209ENST00000510372 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
SNX2-209ENST00000510372 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
SNX2-209ENST00000510372 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
SNX2-209ENST00000510372 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
SNX2-209ENST00000510372 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
SNX2-209ENST00000510372 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.6
SNX2-209ENST00000510372 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
SNX2-209ENST00000510372 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
SNX2-209ENST00000510372 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
SNX2-209ENST00000510372 HAX1O00165 279 aa11.18□□□□□ -0.62
SNX2-209ENST00000510372 NUBP1P53384 320 aa11.13□□□□□ -0.63
SNX2-209ENST00000510372 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
SNX2-209ENST00000510372 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
SNX2-209ENST00000510372 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
SNX2-209ENST00000510372 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
SNX2-209ENST00000510372 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
SNX2-209ENST00000510372 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
SNX2-209ENST00000510372 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
SNX2-209ENST00000510372 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms