RNA–Protein interactions for RNA: ENST00000509654.5

LINC00504-203, long intergenic non-protein coding RNA 504, humanhuman

TSL 1 (best)

Gene LINC00504, Length 822 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-203ENST00000509654 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
LINC00504-203ENST00000509654 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
LINC00504-203ENST00000509654 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
LINC00504-203ENST00000509654 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
LINC00504-203ENST00000509654 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
LINC00504-203ENST00000509654 FOXD1Q16676 465 aa20.83■□□□□ 0.93
LINC00504-203ENST00000509654 MSH5O43196 834 aa19.91■□□□□ 0.78
LINC00504-203ENST00000509654 PIAS4Q8N2W9 510 aaPredicted RBP19.23■□□□□ 0.67
LINC00504-203ENST00000509654 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
LINC00504-203ENST00000509654 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
LINC00504-203ENST00000509654 ADRA2BP18089 450 aa18.57■□□□□ 0.56
LINC00504-203ENST00000509654 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
LINC00504-203ENST00000509654 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
LINC00504-203ENST00000509654 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
LINC00504-203ENST00000509654 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
LINC00504-203ENST00000509654 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
LINC00504-203ENST00000509654 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
LINC00504-203ENST00000509654 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
LINC00504-203ENST00000509654 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
LINC00504-203ENST00000509654 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
LINC00504-203ENST00000509654 POTEHQ6S545 545 aa16.38■□□□□ 0.21
LINC00504-203ENST00000509654 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
LINC00504-203ENST00000509654 KCNA4P22459 653 aa16.14■□□□□ 0.17
LINC00504-203ENST00000509654 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
LINC00504-203ENST00000509654 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
LINC00504-203ENST00000509654 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
LINC00504-203ENST00000509654 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
LINC00504-203ENST00000509654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC00504-203ENST00000509654 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
LINC00504-203ENST00000509654 DSG3P32926 999 aa15.47■□□□□ 0.07
LINC00504-203ENST00000509654 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
LINC00504-203ENST00000509654 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
LINC00504-203ENST00000509654 CAPN15O75808 1086 aa15.32■□□□□ 0.04
LINC00504-203ENST00000509654 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
LINC00504-203ENST00000509654 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
LINC00504-203ENST00000509654 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
LINC00504-203ENST00000509654 ZBTB22O15209 634 aa14.9□□□□□ -0.02
LINC00504-203ENST00000509654 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
LINC00504-203ENST00000509654 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
LINC00504-203ENST00000509654 ABCB7O75027 752 aa14.86□□□□□ -0.03
LINC00504-203ENST00000509654 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
LINC00504-203ENST00000509654 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
LINC00504-203ENST00000509654 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
LINC00504-203ENST00000509654 APLP2Q06481 763 aa14.7□□□□□ -0.06
LINC00504-203ENST00000509654 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
LINC00504-203ENST00000509654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
LINC00504-203ENST00000509654 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
LINC00504-203ENST00000509654 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
LINC00504-203ENST00000509654 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
LINC00504-203ENST00000509654 HAX1O00165 279 aa14.32□□□□□ -0.12
LINC00504-203ENST00000509654 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
LINC00504-203ENST00000509654 POLA2Q14181 598 aa14.24□□□□□ -0.13
LINC00504-203ENST00000509654 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
LINC00504-203ENST00000509654 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
LINC00504-203ENST00000509654 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
LINC00504-203ENST00000509654 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC00504-203ENST00000509654 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
LINC00504-203ENST00000509654 EVX2Q03828 476 aa14.04□□□□□ -0.16
LINC00504-203ENST00000509654 PITPNM1O00562 1244 aa13.96□□□□□ -0.17
LINC00504-203ENST00000509654 LHX8Q68G74 356 aa13.95□□□□□ -0.18
LINC00504-203ENST00000509654 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
LINC00504-203ENST00000509654 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
LINC00504-203ENST00000509654 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
LINC00504-203ENST00000509654 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
LINC00504-203ENST00000509654 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
LINC00504-203ENST00000509654 FKBP8Q14318 412 aa13.81□□□□□ -0.2
LINC00504-203ENST00000509654 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
LINC00504-203ENST00000509654 GABBR2O75899 941 aa13.69□□□□□ -0.22
LINC00504-203ENST00000509654 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
LINC00504-203ENST00000509654 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
LINC00504-203ENST00000509654 FBLN2P98095 1184 aa13.52□□□□□ -0.25
LINC00504-203ENST00000509654 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
LINC00504-203ENST00000509654 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
LINC00504-203ENST00000509654 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
LINC00504-203ENST00000509654 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
LINC00504-203ENST00000509654 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
LINC00504-203ENST00000509654 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
LINC00504-203ENST00000509654 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
LINC00504-203ENST00000509654 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
LINC00504-203ENST00000509654 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
LINC00504-203ENST00000509654 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
LINC00504-203ENST00000509654 POTEMA6NI47 508 aa13.19□□□□□ -0.3
LINC00504-203ENST00000509654 CLCN6P51797 869 aa13.16□□□□□ -0.3
LINC00504-203ENST00000509654 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00504-203ENST00000509654 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
LINC00504-203ENST00000509654 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
LINC00504-203ENST00000509654 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
LINC00504-203ENST00000509654 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
LINC00504-203ENST00000509654 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
LINC00504-203ENST00000509654 PROM2Q8N271 834 aa13.08□□□□□ -0.32
LINC00504-203ENST00000509654 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
LINC00504-203ENST00000509654 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
LINC00504-203ENST00000509654 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
LINC00504-203ENST00000509654 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
LINC00504-203ENST00000509654 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
LINC00504-203ENST00000509654 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
LINC00504-203ENST00000509654 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
LINC00504-203ENST00000509654 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
LINC00504-203ENST00000509654 PLCB2Q00722 1185 aa12.79□□□□□ -0.36
LINC00504-203ENST00000509654 GALR2O43603 387 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms