RNA–Protein interactions for RNA: ENST00000509394.6

SLIT2-208, Transcript of slit guidance ligand 2, humanhuman

TSL 3

Gene SLIT2, Length 712 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-208ENST00000509394 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
SLIT2-208ENST00000509394 CHIC1Q5VXU3 224 aa28.62■■■□□ 2.17
SLIT2-208ENST00000509394 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
SLIT2-208ENST00000509394 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
SLIT2-208ENST00000509394 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
SLIT2-208ENST00000509394 FOXD1Q16676 465 aa23.14■■□□□ 1.29
SLIT2-208ENST00000509394 PPP6R1Q9UPN7 881 aa22.24■■□□□ 1.15
SLIT2-208ENST00000509394 ADRA2BP18089 450 aa22.22■■□□□ 1.15
SLIT2-208ENST00000509394 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
SLIT2-208ENST00000509394 MSH5O43196 834 aa21.34■■□□□ 1.01
SLIT2-208ENST00000509394 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
SLIT2-208ENST00000509394 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
SLIT2-208ENST00000509394 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
SLIT2-208ENST00000509394 KCNA4P22459 653 aa19.95■□□□□ 0.78
SLIT2-208ENST00000509394 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
SLIT2-208ENST00000509394 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
SLIT2-208ENST00000509394 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
SLIT2-208ENST00000509394 NPM3O75607 178 aaKnown RBP19.62■□□□□ 0.73
SLIT2-208ENST00000509394 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
SLIT2-208ENST00000509394 RNF216Q9NWF9 866 aaPredicted RBP19.51■□□□□ 0.71
SLIT2-208ENST00000509394 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
SLIT2-208ENST00000509394 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
SLIT2-208ENST00000509394 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
SLIT2-208ENST00000509394 SLC4A1APQ9BWU0 796 aaKnown RBP18.98■□□□□ 0.63
SLIT2-208ENST00000509394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
SLIT2-208ENST00000509394 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
SLIT2-208ENST00000509394 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
SLIT2-208ENST00000509394 ZBTB22O15209 634 aa18.36■□□□□ 0.53
SLIT2-208ENST00000509394 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
SLIT2-208ENST00000509394 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
SLIT2-208ENST00000509394 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
SLIT2-208ENST00000509394 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
SLIT2-208ENST00000509394 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
SLIT2-208ENST00000509394 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
SLIT2-208ENST00000509394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
SLIT2-208ENST00000509394 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
SLIT2-208ENST00000509394 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
SLIT2-208ENST00000509394 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
SLIT2-208ENST00000509394 APLP2Q06481 763 aa17.79■□□□□ 0.44
SLIT2-208ENST00000509394 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
SLIT2-208ENST00000509394 CAPN15O75808 1086 aa17.7■□□□□ 0.42
SLIT2-208ENST00000509394 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
SLIT2-208ENST00000509394 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
SLIT2-208ENST00000509394 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
SLIT2-208ENST00000509394 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
SLIT2-208ENST00000509394 DSG3P32926 999 aa17.39■□□□□ 0.37
SLIT2-208ENST00000509394 ABCB7O75027 752 aa17.37■□□□□ 0.37
SLIT2-208ENST00000509394 POLA2Q14181 598 aa17.29■□□□□ 0.36
SLIT2-208ENST00000509394 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
SLIT2-208ENST00000509394 FBLN2P98095 1184 aa16.91■□□□□ 0.3
SLIT2-208ENST00000509394 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
SLIT2-208ENST00000509394 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
SLIT2-208ENST00000509394 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
SLIT2-208ENST00000509394 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
SLIT2-208ENST00000509394 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
SLIT2-208ENST00000509394 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
SLIT2-208ENST00000509394 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
SLIT2-208ENST00000509394 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
SLIT2-208ENST00000509394 FKBP8Q14318 412 aa16.46■□□□□ 0.23
SLIT2-208ENST00000509394 SSUH2Q9Y2M2 353 aa16.4■□□□□ 0.22
SLIT2-208ENST00000509394 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
SLIT2-208ENST00000509394 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
SLIT2-208ENST00000509394 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
SLIT2-208ENST00000509394 PROM2Q8N271 834 aa16.18■□□□□ 0.18
SLIT2-208ENST00000509394 SPDYE1Q8NFV5 336 aaPredicted RBP16.06■□□□□ 0.16
SLIT2-208ENST00000509394 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
SLIT2-208ENST00000509394 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
SLIT2-208ENST00000509394 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
SLIT2-208ENST00000509394 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
SLIT2-208ENST00000509394 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
SLIT2-208ENST00000509394 PRR29P0C7W0 189 aa15.84■□□□□ 0.13
SLIT2-208ENST00000509394 FXR2P51116 673 aaKnown RBP eCLIP15.72■□□□□ 0.11
SLIT2-208ENST00000509394 PIP4P2Q8N4L2 257 aa15.71■□□□□ 0.11
SLIT2-208ENST00000509394 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
SLIT2-208ENST00000509394 MIER1Q8N108 512 aa15.64■□□□□ 0.09
SLIT2-208ENST00000509394 CREBZFQ9NS37 354 aa15.64■□□□□ 0.09
SLIT2-208ENST00000509394 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
SLIT2-208ENST00000509394 CHADLQ6NUI6 762 aa15.63■□□□□ 0.09
SLIT2-208ENST00000509394 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
SLIT2-208ENST00000509394 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
SLIT2-208ENST00000509394 POTEHQ6S545 545 aa15.47■□□□□ 0.07
SLIT2-208ENST00000509394 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
SLIT2-208ENST00000509394 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
SLIT2-208ENST00000509394 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
SLIT2-208ENST00000509394 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
SLIT2-208ENST00000509394 ZBTB47Q9UFB7 747 aaPredicted RBP15.42■□□□□ 0.06
SLIT2-208ENST00000509394 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
SLIT2-208ENST00000509394 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
SLIT2-208ENST00000509394 NUBP1P53384 320 aa15.24■□□□□ 0.03
SLIT2-208ENST00000509394 HAX1O00165 279 aa15.22■□□□□ 0.03
SLIT2-208ENST00000509394 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
SLIT2-208ENST00000509394 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
SLIT2-208ENST00000509394 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
SLIT2-208ENST00000509394 TSPYL2Q9H2G4 693 aaPredicted RBP15.14■□□□□ 0.01
SLIT2-208ENST00000509394 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
SLIT2-208ENST00000509394 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
SLIT2-208ENST00000509394 EVX2Q03828 476 aa15.09■□□□□ 0.01
SLIT2-208ENST00000509394 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
SLIT2-208ENST00000509394 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
SLIT2-208ENST00000509394 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms