RNA–Protein interactions for RNA: ENST00000509256.1

PDZD2-206, Transcript of PDZ domain containing 2, humanhuman

TSL 5

Gene PDZD2, Length 498 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-206ENST00000509256 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
PDZD2-206ENST00000509256 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
PDZD2-206ENST00000509256 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
PDZD2-206ENST00000509256 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
PDZD2-206ENST00000509256 FOXD1Q16676 465 aa19.07■□□□□ 0.64
PDZD2-206ENST00000509256 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
PDZD2-206ENST00000509256 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
PDZD2-206ENST00000509256 ADRA2BP18089 450 aa18.34■□□□□ 0.53
PDZD2-206ENST00000509256 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
PDZD2-206ENST00000509256 MSH5O43196 834 aa17.47■□□□□ 0.39
PDZD2-206ENST00000509256 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
PDZD2-206ENST00000509256 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
PDZD2-206ENST00000509256 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
PDZD2-206ENST00000509256 KCNA4P22459 653 aa16.35■□□□□ 0.21
PDZD2-206ENST00000509256 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
PDZD2-206ENST00000509256 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
PDZD2-206ENST00000509256 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
PDZD2-206ENST00000509256 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
PDZD2-206ENST00000509256 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
PDZD2-206ENST00000509256 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
PDZD2-206ENST00000509256 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
PDZD2-206ENST00000509256 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
PDZD2-206ENST00000509256 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
PDZD2-206ENST00000509256 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
PDZD2-206ENST00000509256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.03
PDZD2-206ENST00000509256 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
PDZD2-206ENST00000509256 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
PDZD2-206ENST00000509256 ZBTB22O15209 634 aa15.06■□□□□ 0
PDZD2-206ENST00000509256 RNF39Q9H2S5 420 aa15.02■□□□□ -0
PDZD2-206ENST00000509256 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
PDZD2-206ENST00000509256 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
PDZD2-206ENST00000509256 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
PDZD2-206ENST00000509256 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
PDZD2-206ENST00000509256 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.05
PDZD2-206ENST00000509256 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
PDZD2-206ENST00000509256 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
PDZD2-206ENST00000509256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
PDZD2-206ENST00000509256 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
PDZD2-206ENST00000509256 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
PDZD2-206ENST00000509256 CAPN15O75808 1086 aa14.57□□□□□ -0.08
PDZD2-206ENST00000509256 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
PDZD2-206ENST00000509256 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
PDZD2-206ENST00000509256 APLP2Q06481 763 aa14.42□□□□□ -0.1
PDZD2-206ENST00000509256 ABCB7O75027 752 aa14.36□□□□□ -0.11
PDZD2-206ENST00000509256 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
PDZD2-206ENST00000509256 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
PDZD2-206ENST00000509256 DSG3P32926 999 aa14.3□□□□□ -0.12
PDZD2-206ENST00000509256 POLA2Q14181 598 aa14.22□□□□□ -0.13
PDZD2-206ENST00000509256 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
PDZD2-206ENST00000509256 FBLN2P98095 1184 aa13.79□□□□□ -0.2
PDZD2-206ENST00000509256 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
PDZD2-206ENST00000509256 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
PDZD2-206ENST00000509256 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
PDZD2-206ENST00000509256 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
PDZD2-206ENST00000509256 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
PDZD2-206ENST00000509256 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
PDZD2-206ENST00000509256 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
PDZD2-206ENST00000509256 FKBP8Q14318 412 aa13.47□□□□□ -0.25
PDZD2-206ENST00000509256 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
PDZD2-206ENST00000509256 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
PDZD2-206ENST00000509256 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
PDZD2-206ENST00000509256 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDZD2-206ENST00000509256 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
PDZD2-206ENST00000509256 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
PDZD2-206ENST00000509256 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
PDZD2-206ENST00000509256 PROM2Q8N271 834 aa13.13□□□□□ -0.31
PDZD2-206ENST00000509256 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
PDZD2-206ENST00000509256 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
PDZD2-206ENST00000509256 PRR29P0C7W0 189 aa13□□□□□ -0.33
PDZD2-206ENST00000509256 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
PDZD2-206ENST00000509256 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
PDZD2-206ENST00000509256 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
PDZD2-206ENST00000509256 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDZD2-206ENST00000509256 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
PDZD2-206ENST00000509256 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
PDZD2-206ENST00000509256 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
PDZD2-206ENST00000509256 MIER1Q8N108 512 aa12.82□□□□□ -0.36
PDZD2-206ENST00000509256 POTEHQ6S545 545 aa12.79□□□□□ -0.36
PDZD2-206ENST00000509256 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
PDZD2-206ENST00000509256 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
PDZD2-206ENST00000509256 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
PDZD2-206ENST00000509256 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
PDZD2-206ENST00000509256 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
PDZD2-206ENST00000509256 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
PDZD2-206ENST00000509256 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
PDZD2-206ENST00000509256 HAX1O00165 279 aa12.58□□□□□ -0.4
PDZD2-206ENST00000509256 EVX2Q03828 476 aa12.54□□□□□ -0.4
PDZD2-206ENST00000509256 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDZD2-206ENST00000509256 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
PDZD2-206ENST00000509256 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
PDZD2-206ENST00000509256 CD44P16070 742 aaKnown RBP12.47□□□□□ -0.41
PDZD2-206ENST00000509256 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
PDZD2-206ENST00000509256 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
PDZD2-206ENST00000509256 NUBP1P53384 320 aa12.46□□□□□ -0.41
PDZD2-206ENST00000509256 SPOCK2Q92563 424 aa12.43□□□□□ -0.42
PDZD2-206ENST00000509256 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
PDZD2-206ENST00000509256 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
PDZD2-206ENST00000509256 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
PDZD2-206ENST00000509256 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
PDZD2-206ENST00000509256 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms