RNA–Protein interactions for RNA: ENST00000508804.5

LDB2-210, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-210ENST00000508804 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
LDB2-210ENST00000508804 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
LDB2-210ENST00000508804 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
LDB2-210ENST00000508804 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
LDB2-210ENST00000508804 FOXD1Q16676 465 aa13.41□□□□□ -0.26
LDB2-210ENST00000508804 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
LDB2-210ENST00000508804 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
LDB2-210ENST00000508804 ADRA2BP18089 450 aa12.69□□□□□ -0.38
LDB2-210ENST00000508804 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
LDB2-210ENST00000508804 MSH5O43196 834 aa12.44□□□□□ -0.42
LDB2-210ENST00000508804 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
LDB2-210ENST00000508804 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
LDB2-210ENST00000508804 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
LDB2-210ENST00000508804 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
LDB2-210ENST00000508804 DMRT2Q9Y5R5 561 aa11.42□□□□□ -0.58
LDB2-210ENST00000508804 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
LDB2-210ENST00000508804 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
LDB2-210ENST00000508804 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
LDB2-210ENST00000508804 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
LDB2-210ENST00000508804 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
LDB2-210ENST00000508804 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
LDB2-210ENST00000508804 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
LDB2-210ENST00000508804 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
LDB2-210ENST00000508804 KCNA4P22459 653 aa10.89□□□□□ -0.67
LDB2-210ENST00000508804 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
LDB2-210ENST00000508804 RNF39Q9H2S5 420 aa10.64□□□□□ -0.71
LDB2-210ENST00000508804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
LDB2-210ENST00000508804 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
LDB2-210ENST00000508804 C1QBPQ07021 282 aaKnown RBP10.48□□□□□ -0.73
LDB2-210ENST00000508804 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
LDB2-210ENST00000508804 SLC4A2P04920 1241 aa10.38□□□□□ -0.75
LDB2-210ENST00000508804 CSRNP3Q8WYN3 585 aa10.37□□□□□ -0.75
LDB2-210ENST00000508804 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
LDB2-210ENST00000508804 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
LDB2-210ENST00000508804 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
LDB2-210ENST00000508804 CAPN15O75808 1086 aa10.2□□□□□ -0.78
LDB2-210ENST00000508804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
LDB2-210ENST00000508804 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
LDB2-210ENST00000508804 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
LDB2-210ENST00000508804 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
LDB2-210ENST00000508804 SAMD1Q6SPF0 538 aaPredicted RBP10.07□□□□□ -0.8
LDB2-210ENST00000508804 FOXD4L1Q9NU39 408 aa10.07□□□□□ -0.8
LDB2-210ENST00000508804 APLP2Q06481 763 aa10.06□□□□□ -0.8
LDB2-210ENST00000508804 DSG3P32926 999 aa10.05□□□□□ -0.8
LDB2-210ENST00000508804 ZBTB22O15209 634 aa10.01□□□□□ -0.81
LDB2-210ENST00000508804 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
LDB2-210ENST00000508804 ABCB7O75027 752 aa10□□□□□ -0.81
LDB2-210ENST00000508804 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
LDB2-210ENST00000508804 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
LDB2-210ENST00000508804 ATF5Q9Y2D1 282 aaPredicted RBP9.88□□□□□ -0.83
LDB2-210ENST00000508804 POLA2Q14181 598 aa9.83□□□□□ -0.84
LDB2-210ENST00000508804 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
LDB2-210ENST00000508804 ZBTB12Q9Y330 459 aaPredicted RBP9.57□□□□□ -0.88
LDB2-210ENST00000508804 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
LDB2-210ENST00000508804 OSCARQ8IYS5 282 aa9.51□□□□□ -0.89
LDB2-210ENST00000508804 FBLN2P98095 1184 aa9.46□□□□□ -0.9
LDB2-210ENST00000508804 CCDC180Q9P1Z9 1646 aa9.45□□□□□ -0.9
LDB2-210ENST00000508804 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
LDB2-210ENST00000508804 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
LDB2-210ENST00000508804 ZCCHC6Q5VYS8 1495 aaKnown RBP9.36□□□□□ -0.91
LDB2-210ENST00000508804 POTEHQ6S545 545 aa9.36□□□□□ -0.91
LDB2-210ENST00000508804 FKBP8Q14318 412 aa9.34□□□□□ -0.91
LDB2-210ENST00000508804 REM2Q8IYK8 340 aaPredicted RBP9.32□□□□□ -0.92
LDB2-210ENST00000508804 SPDYE2BA6NHP3 402 aa9.31□□□□□ -0.92
LDB2-210ENST00000508804 SPDYE6P0CI01 402 aa9.31□□□□□ -0.92
LDB2-210ENST00000508804 SPDYE2Q495Y8 402 aa9.31□□□□□ -0.92
LDB2-210ENST00000508804 CHRDL2Q6WN34 429 aa9.3□□□□□ -0.92
LDB2-210ENST00000508804 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
LDB2-210ENST00000508804 DCAF1Q9Y4B6 1507 aa9.26□□□□□ -0.93
LDB2-210ENST00000508804 SUPT5HO00267 1087 aaKnown RBP9.24□□□□□ -0.93
LDB2-210ENST00000508804 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
LDB2-210ENST00000508804 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.94
LDB2-210ENST00000508804 HRCP23327 699 aa9.2□□□□□ -0.94
LDB2-210ENST00000508804 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
LDB2-210ENST00000508804 PRKCSHP14314 528 aaPredicted RBP9.17□□□□□ -0.94
LDB2-210ENST00000508804 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
LDB2-210ENST00000508804 ZEB1P37275 1124 aaPredicted RBP9.15□□□□□ -0.94
LDB2-210ENST00000508804 PLCB2Q00722 1185 aa9.15□□□□□ -0.94
LDB2-210ENST00000508804 PABPN1Q86U42 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
LDB2-210ENST00000508804 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
LDB2-210ENST00000508804 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
LDB2-210ENST00000508804 BCANQ96GW7 911 aa9.12□□□□□ -0.95
LDB2-210ENST00000508804 FXR2P51116 673 aaKnown RBP eCLIP9.08□□□□□ -0.96
LDB2-210ENST00000508804 PELP1Q8IZL8 1130 aaKnown RBP9.08□□□□□ -0.96
LDB2-210ENST00000508804 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
LDB2-210ENST00000508804 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
LDB2-210ENST00000508804 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
LDB2-210ENST00000508804 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.97
LDB2-210ENST00000508804 PRR29P0C7W0 189 aa9.01□□□□□ -0.97
LDB2-210ENST00000508804 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
LDB2-210ENST00000508804 PRKAR2AP13861 404 aaKnown RBP9□□□□□ -0.97
LDB2-210ENST00000508804 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
LDB2-210ENST00000508804 PCGF6Q9BYE7 350 aa8.98□□□□□ -0.97
LDB2-210ENST00000508804 CHADLQ6NUI6 762 aa8.97□□□□□ -0.97
LDB2-210ENST00000508804 HAX1O00165 279 aa8.96□□□□□ -0.98
LDB2-210ENST00000508804 TPRNQ4KMQ1 711 aa8.93□□□□□ -0.98
LDB2-210ENST00000508804 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
LDB2-210ENST00000508804 MYT1Q01538 1121 aa8.88□□□□□ -0.99
LDB2-210ENST00000508804 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
LDB2-210ENST00000508804 EVX2Q03828 476 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms