RNA–Protein interactions for RNA: ENST00000508714.5

LINC00613-203, long intergenic non-protein coding RNA 613, humanhuman

TSL 3

Gene LINC00613, Length 323 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00613-203ENST00000508714 AEBP2Q6ZN18 517 aaPredicted RBP19.82■□□□□ 0.76
LINC00613-203ENST00000508714 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
LINC00613-203ENST00000508714 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
LINC00613-203ENST00000508714 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
LINC00613-203ENST00000508714 FOXD1Q16676 465 aa15.92■□□□□ 0.14
LINC00613-203ENST00000508714 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
LINC00613-203ENST00000508714 MSH5O43196 834 aa15.1■□□□□ 0.01
LINC00613-203ENST00000508714 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
LINC00613-203ENST00000508714 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
LINC00613-203ENST00000508714 ADRA2BP18089 450 aa14.35□□□□□ -0.11
LINC00613-203ENST00000508714 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
LINC00613-203ENST00000508714 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
LINC00613-203ENST00000508714 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
LINC00613-203ENST00000508714 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
LINC00613-203ENST00000508714 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
LINC00613-203ENST00000508714 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
LINC00613-203ENST00000508714 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
LINC00613-203ENST00000508714 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
LINC00613-203ENST00000508714 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
LINC00613-203ENST00000508714 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
LINC00613-203ENST00000508714 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
LINC00613-203ENST00000508714 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
LINC00613-203ENST00000508714 POTEHQ6S545 545 aa12.27□□□□□ -0.45
LINC00613-203ENST00000508714 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
LINC00613-203ENST00000508714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00613-203ENST00000508714 DSG3P32926 999 aa11.83□□□□□ -0.52
LINC00613-203ENST00000508714 CAPN15O75808 1086 aa11.78□□□□□ -0.52
LINC00613-203ENST00000508714 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
LINC00613-203ENST00000508714 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
LINC00613-203ENST00000508714 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
LINC00613-203ENST00000508714 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
LINC00613-203ENST00000508714 ABCB7O75027 752 aa11.47□□□□□ -0.57
LINC00613-203ENST00000508714 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
LINC00613-203ENST00000508714 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
LINC00613-203ENST00000508714 APLP2Q06481 763 aa11.3□□□□□ -0.6
LINC00613-203ENST00000508714 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
LINC00613-203ENST00000508714 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
LINC00613-203ENST00000508714 SLC4A2P04920 1241 aa11.25□□□□□ -0.61
LINC00613-203ENST00000508714 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
LINC00613-203ENST00000508714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
LINC00613-203ENST00000508714 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
LINC00613-203ENST00000508714 SAMD1Q6SPF0 538 aaPredicted RBP11.07□□□□□ -0.64
LINC00613-203ENST00000508714 POLA2Q14181 598 aa10.98□□□□□ -0.65
LINC00613-203ENST00000508714 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
LINC00613-203ENST00000508714 HAX1O00165 279 aa10.89□□□□□ -0.67
LINC00613-203ENST00000508714 AKT1S1Q96B36 256 aa10.89□□□□□ -0.67
LINC00613-203ENST00000508714 KCNA4P22459 653 aa10.87□□□□□ -0.67
LINC00613-203ENST00000508714 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
LINC00613-203ENST00000508714 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
LINC00613-203ENST00000508714 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
LINC00613-203ENST00000508714 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00613-203ENST00000508714 EVX2Q03828 476 aa10.71□□□□□ -0.69
LINC00613-203ENST00000508714 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
LINC00613-203ENST00000508714 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
LINC00613-203ENST00000508714 ATF5Q9Y2D1 282 aaPredicted RBP10.58□□□□□ -0.72
LINC00613-203ENST00000508714 LHX8Q68G74 356 aa10.51□□□□□ -0.73
LINC00613-203ENST00000508714 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
LINC00613-203ENST00000508714 GABBR2O75899 941 aa10.41□□□□□ -0.74
LINC00613-203ENST00000508714 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
LINC00613-203ENST00000508714 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
LINC00613-203ENST00000508714 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
LINC00613-203ENST00000508714 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
LINC00613-203ENST00000508714 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
LINC00613-203ENST00000508714 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
LINC00613-203ENST00000508714 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
LINC00613-203ENST00000508714 SPDYE1Q8NFV5 336 aaPredicted RBP10.28□□□□□ -0.76
LINC00613-203ENST00000508714 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
LINC00613-203ENST00000508714 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
LINC00613-203ENST00000508714 FBLN2P98095 1184 aa10.18□□□□□ -0.78
LINC00613-203ENST00000508714 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
LINC00613-203ENST00000508714 ZNF692Q9BU19 519 aaPredicted RBP10.11□□□□□ -0.79
LINC00613-203ENST00000508714 SSUH2Q9Y2M2 353 aa10.09□□□□□ -0.79
LINC00613-203ENST00000508714 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
LINC00613-203ENST00000508714 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
LINC00613-203ENST00000508714 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
LINC00613-203ENST00000508714 DCBLD2Q96PD2 775 aa10.02□□□□□ -0.81
LINC00613-203ENST00000508714 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
LINC00613-203ENST00000508714 ZBTB22O15209 634 aa9.98□□□□□ -0.81
LINC00613-203ENST00000508714 CLCN6P51797 869 aa9.98□□□□□ -0.81
LINC00613-203ENST00000508714 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
LINC00613-203ENST00000508714 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00613-203ENST00000508714 POTEMA6NI47 508 aa9.94□□□□□ -0.82
LINC00613-203ENST00000508714 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
LINC00613-203ENST00000508714 POTEGQ6S5H5 508 aa9.88□□□□□ -0.83
LINC00613-203ENST00000508714 POTEB2H3BUK9 544 aa9.86□□□□□ -0.83
LINC00613-203ENST00000508714 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
LINC00613-203ENST00000508714 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
LINC00613-203ENST00000508714 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
LINC00613-203ENST00000508714 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
LINC00613-203ENST00000508714 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
LINC00613-203ENST00000508714 PHF12Q96QT6 1004 aa9.66□□□□□ -0.86
LINC00613-203ENST00000508714 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
LINC00613-203ENST00000508714 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
LINC00613-203ENST00000508714 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
LINC00613-203ENST00000508714 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
LINC00613-203ENST00000508714 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
LINC00613-203ENST00000508714 FAM163AQ96GL9 167 aaPredicted RBP9.59□□□□□ -0.87
LINC00613-203ENST00000508714 MAMSTRQ6ZN01 415 aa9.55□□□□□ -0.88
LINC00613-203ENST00000508714 ASTLQ6HA08 431 aaPredicted RBP9.54□□□□□ -0.88
LINC00613-203ENST00000508714 SLC39A7Q92504 469 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms