RNA–Protein interactions for RNA: ENST00000508560.5

GABRA4-203, Transcript of gamma-aminobutyric acid type A receptor alpha4 subunit, humanhuman

TSL 3

Gene GABRA4, Length 1,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4-203ENST00000508560 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
GABRA4-203ENST00000508560 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
GABRA4-203ENST00000508560 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
GABRA4-203ENST00000508560 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
GABRA4-203ENST00000508560 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
GABRA4-203ENST00000508560 FOXD1Q16676 465 aa13.7□□□□□ -0.22
GABRA4-203ENST00000508560 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
GABRA4-203ENST00000508560 ADRA2BP18089 450 aa13.2□□□□□ -0.3
GABRA4-203ENST00000508560 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
GABRA4-203ENST00000508560 MSH5O43196 834 aa12.62□□□□□ -0.39
GABRA4-203ENST00000508560 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
GABRA4-203ENST00000508560 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
GABRA4-203ENST00000508560 KCNA4P22459 653 aa11.97□□□□□ -0.49
GABRA4-203ENST00000508560 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
GABRA4-203ENST00000508560 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
GABRA4-203ENST00000508560 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
GABRA4-203ENST00000508560 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
GABRA4-203ENST00000508560 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
GABRA4-203ENST00000508560 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
GABRA4-203ENST00000508560 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
GABRA4-203ENST00000508560 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
GABRA4-203ENST00000508560 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
GABRA4-203ENST00000508560 DNAJC5BQ9UF47 199 aa11.33□□□□□ -0.6
GABRA4-203ENST00000508560 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
GABRA4-203ENST00000508560 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
GABRA4-203ENST00000508560 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
GABRA4-203ENST00000508560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.03□□□□□ -0.64
GABRA4-203ENST00000508560 ZBTB22O15209 634 aa11□□□□□ -0.65
GABRA4-203ENST00000508560 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
GABRA4-203ENST00000508560 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
GABRA4-203ENST00000508560 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
GABRA4-203ENST00000508560 MYCNP04198 464 aaPredicted RBP10.83□□□□□ -0.68
GABRA4-203ENST00000508560 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
GABRA4-203ENST00000508560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
GABRA4-203ENST00000508560 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
GABRA4-203ENST00000508560 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
GABRA4-203ENST00000508560 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
GABRA4-203ENST00000508560 APLP2Q06481 763 aa10.6□□□□□ -0.71
GABRA4-203ENST00000508560 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
GABRA4-203ENST00000508560 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
GABRA4-203ENST00000508560 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
GABRA4-203ENST00000508560 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
GABRA4-203ENST00000508560 CAPN15O75808 1086 aa10.51□□□□□ -0.73
GABRA4-203ENST00000508560 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
GABRA4-203ENST00000508560 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.74
GABRA4-203ENST00000508560 ABCB7O75027 752 aa10.32□□□□□ -0.76
GABRA4-203ENST00000508560 DSG3P32926 999 aa10.3□□□□□ -0.76
GABRA4-203ENST00000508560 POLA2Q14181 598 aa10.29□□□□□ -0.76
GABRA4-203ENST00000508560 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
GABRA4-203ENST00000508560 FBLN2P98095 1184 aa10.1□□□□□ -0.79
GABRA4-203ENST00000508560 MKRN4PQ13434 485 aaPredicted RBP10.08□□□□□ -0.8
GABRA4-203ENST00000508560 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
GABRA4-203ENST00000508560 OSCARQ8IYS5 282 aa9.96□□□□□ -0.81
GABRA4-203ENST00000508560 FKBP8Q14318 412 aa9.93□□□□□ -0.82
GABRA4-203ENST00000508560 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
GABRA4-203ENST00000508560 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
GABRA4-203ENST00000508560 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
GABRA4-203ENST00000508560 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
GABRA4-203ENST00000508560 RBM42Q9BTD8 480 aaKnown RBP9.82□□□□□ -0.84
GABRA4-203ENST00000508560 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
GABRA4-203ENST00000508560 SSUH2Q9Y2M2 353 aa9.77□□□□□ -0.85
GABRA4-203ENST00000508560 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
GABRA4-203ENST00000508560 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
GABRA4-203ENST00000508560 PROM2Q8N271 834 aa9.69□□□□□ -0.86
GABRA4-203ENST00000508560 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
GABRA4-203ENST00000508560 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
GABRA4-203ENST00000508560 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
GABRA4-203ENST00000508560 CLEC11AQ9Y240 323 aa9.53□□□□□ -0.88
GABRA4-203ENST00000508560 STAG3Q9UJ98 1225 aa9.52□□□□□ -0.88
GABRA4-203ENST00000508560 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
GABRA4-203ENST00000508560 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
GABRA4-203ENST00000508560 VASPP50552 380 aaPredicted RBP9.43□□□□□ -0.9
GABRA4-203ENST00000508560 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
GABRA4-203ENST00000508560 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
GABRA4-203ENST00000508560 MIER1Q8N108 512 aa9.36□□□□□ -0.91
GABRA4-203ENST00000508560 PLEKHG5O94827 1062 aa9.32□□□□□ -0.92
GABRA4-203ENST00000508560 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
GABRA4-203ENST00000508560 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
GABRA4-203ENST00000508560 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
GABRA4-203ENST00000508560 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
GABRA4-203ENST00000508560 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
GABRA4-203ENST00000508560 PRKAR2AP13861 404 aaKnown RBP9.27□□□□□ -0.92
GABRA4-203ENST00000508560 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
GABRA4-203ENST00000508560 ZBTB47Q9UFB7 747 aaPredicted RBP9.24□□□□□ -0.93
GABRA4-203ENST00000508560 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
GABRA4-203ENST00000508560 FARP1Q9Y4F1 1045 aaPredicted RBP9.19□□□□□ -0.94
GABRA4-203ENST00000508560 SPOCK2Q92563 424 aa9.18□□□□□ -0.94
GABRA4-203ENST00000508560 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
GABRA4-203ENST00000508560 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
GABRA4-203ENST00000508560 NUBP1P53384 320 aa9.11□□□□□ -0.95
GABRA4-203ENST00000508560 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
GABRA4-203ENST00000508560 POTEHQ6S545 545 aa9.08□□□□□ -0.96
GABRA4-203ENST00000508560 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
GABRA4-203ENST00000508560 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
GABRA4-203ENST00000508560 FAM212AQ96EL1 285 aa9.06□□□□□ -0.96
GABRA4-203ENST00000508560 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
GABRA4-203ENST00000508560 DCAF8Q5TAQ9 597 aa9.04□□□□□ -0.96
GABRA4-203ENST00000508560 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
GABRA4-203ENST00000508560 GSE1Q14687 1217 aa9.02□□□□□ -0.97
GABRA4-203ENST00000508560 PAK3O75914 559 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms