RNA–Protein interactions for RNA: ENST00000508212.5

EXOSC9-206, Transcript of exosome component 9, humanhuman

TSL 3

Gene EXOSC9, Length 612 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-206ENST00000508212 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
EXOSC9-206ENST00000508212 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
EXOSC9-206ENST00000508212 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
EXOSC9-206ENST00000508212 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
EXOSC9-206ENST00000508212 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
EXOSC9-206ENST00000508212 FOXD1Q16676 465 aa19.51■□□□□ 0.71
EXOSC9-206ENST00000508212 ADRA2BP18089 450 aa18.74■□□□□ 0.59
EXOSC9-206ENST00000508212 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
EXOSC9-206ENST00000508212 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
EXOSC9-206ENST00000508212 MSH5O43196 834 aa18.13■□□□□ 0.49
EXOSC9-206ENST00000508212 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
EXOSC9-206ENST00000508212 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
EXOSC9-206ENST00000508212 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
EXOSC9-206ENST00000508212 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
EXOSC9-206ENST00000508212 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
EXOSC9-206ENST00000508212 KCNA4P22459 653 aa16.85■□□□□ 0.29
EXOSC9-206ENST00000508212 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
EXOSC9-206ENST00000508212 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
EXOSC9-206ENST00000508212 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
EXOSC9-206ENST00000508212 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
EXOSC9-206ENST00000508212 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
EXOSC9-206ENST00000508212 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
EXOSC9-206ENST00000508212 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
EXOSC9-206ENST00000508212 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
EXOSC9-206ENST00000508212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.121e-6■■■■□ 20.8
EXOSC9-206ENST00000508212 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
EXOSC9-206ENST00000508212 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
EXOSC9-206ENST00000508212 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
EXOSC9-206ENST00000508212 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
EXOSC9-206ENST00000508212 ZBTB22O15209 634 aa15.42■□□□□ 0.06
EXOSC9-206ENST00000508212 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
EXOSC9-206ENST00000508212 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
EXOSC9-206ENST00000508212 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
EXOSC9-206ENST00000508212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
EXOSC9-206ENST00000508212 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
EXOSC9-206ENST00000508212 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
EXOSC9-206ENST00000508212 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
EXOSC9-206ENST00000508212 APLP2Q06481 763 aa15.26■□□□□ 0.03
EXOSC9-206ENST00000508212 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
EXOSC9-206ENST00000508212 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
EXOSC9-206ENST00000508212 CAPN15O75808 1086 aa15.04■□□□□ -0
EXOSC9-206ENST00000508212 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
EXOSC9-206ENST00000508212 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
EXOSC9-206ENST00000508212 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
EXOSC9-206ENST00000508212 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
EXOSC9-206ENST00000508212 ABCB7O75027 752 aa14.69□□□□□ -0.06
EXOSC9-206ENST00000508212 DSG3P32926 999 aa14.69□□□□□ -0.06
EXOSC9-206ENST00000508212 POLA2Q14181 598 aa14.65□□□□□ -0.06
EXOSC9-206ENST00000508212 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
EXOSC9-206ENST00000508212 FBLN2P98095 1184 aa14.45□□□□□ -0.1
EXOSC9-206ENST00000508212 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
EXOSC9-206ENST00000508212 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
EXOSC9-206ENST00000508212 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
EXOSC9-206ENST00000508212 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
EXOSC9-206ENST00000508212 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
EXOSC9-206ENST00000508212 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
EXOSC9-206ENST00000508212 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
EXOSC9-206ENST00000508212 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
EXOSC9-206ENST00000508212 FKBP8Q14318 412 aa14□□□□□ -0.17
EXOSC9-206ENST00000508212 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
EXOSC9-206ENST00000508212 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
EXOSC9-206ENST00000508212 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
EXOSC9-206ENST00000508212 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
EXOSC9-206ENST00000508212 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
EXOSC9-206ENST00000508212 PROM2Q8N271 834 aa13.66□□□□□ -0.22
EXOSC9-206ENST00000508212 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
EXOSC9-206ENST00000508212 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
EXOSC9-206ENST00000508212 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
EXOSC9-206ENST00000508212 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
EXOSC9-206ENST00000508212 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
EXOSC9-206ENST00000508212 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
EXOSC9-206ENST00000508212 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
EXOSC9-206ENST00000508212 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
EXOSC9-206ENST00000508212 MIER1Q8N108 512 aa13.33□□□□□ -0.28
EXOSC9-206ENST00000508212 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
EXOSC9-206ENST00000508212 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
EXOSC9-206ENST00000508212 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
EXOSC9-206ENST00000508212 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
EXOSC9-206ENST00000508212 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
EXOSC9-206ENST00000508212 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
EXOSC9-206ENST00000508212 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
EXOSC9-206ENST00000508212 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
EXOSC9-206ENST00000508212 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
EXOSC9-206ENST00000508212 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
EXOSC9-206ENST00000508212 POTEHQ6S545 545 aa13.07□□□□□ -0.32
EXOSC9-206ENST00000508212 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
EXOSC9-206ENST00000508212 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
EXOSC9-206ENST00000508212 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
EXOSC9-206ENST00000508212 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
EXOSC9-206ENST00000508212 HAX1O00165 279 aa12.92□□□□□ -0.34
EXOSC9-206ENST00000508212 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
EXOSC9-206ENST00000508212 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
EXOSC9-206ENST00000508212 NUBP1P53384 320 aa12.88□□□□□ -0.35
EXOSC9-206ENST00000508212 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
EXOSC9-206ENST00000508212 GSE1Q14687 1217 aa12.86□□□□□ -0.35
EXOSC9-206ENST00000508212 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
EXOSC9-206ENST00000508212 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
EXOSC9-206ENST00000508212 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
EXOSC9-206ENST00000508212 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
EXOSC9-206ENST00000508212 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms