RNA–Protein interactions for RNA: ENST00000507447.1

SLC38A9-214, Transcript of solute carrier family 38 member 9, humanhuman

TSL 3

Gene SLC38A9, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-214ENST00000507447 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
SLC38A9-214ENST00000507447 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
SLC38A9-214ENST00000507447 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
SLC38A9-214ENST00000507447 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
SLC38A9-214ENST00000507447 FOXD1Q16676 465 aa22.35■■□□□ 1.17
SLC38A9-214ENST00000507447 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
SLC38A9-214ENST00000507447 MSH5O43196 834 aa21.1■□□□□ 0.97
SLC38A9-214ENST00000507447 PIAS4Q8N2W9 510 aaPredicted RBP20.7■□□□□ 0.9
SLC38A9-214ENST00000507447 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
SLC38A9-214ENST00000507447 ADRA2BP18089 450 aa20.23■□□□□ 0.83
SLC38A9-214ENST00000507447 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
SLC38A9-214ENST00000507447 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
SLC38A9-214ENST00000507447 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
SLC38A9-214ENST00000507447 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
SLC38A9-214ENST00000507447 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
SLC38A9-214ENST00000507447 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
SLC38A9-214ENST00000507447 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
SLC38A9-214ENST00000507447 HOXD11P31277 338 aaPredicted RBP17.68■□□□□ 0.42
SLC38A9-214ENST00000507447 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
SLC38A9-214ENST00000507447 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
SLC38A9-214ENST00000507447 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
SLC38A9-214ENST00000507447 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
SLC38A9-214ENST00000507447 POTEHQ6S545 545 aa17.15■□□□□ 0.34
SLC38A9-214ENST00000507447 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
SLC38A9-214ENST00000507447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
SLC38A9-214ENST00000507447 DSG3P32926 999 aa16.6■□□□□ 0.25
SLC38A9-214ENST00000507447 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
SLC38A9-214ENST00000507447 CAPN15O75808 1086 aa16.57■□□□□ 0.24
SLC38A9-214ENST00000507447 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
SLC38A9-214ENST00000507447 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
SLC38A9-214ENST00000507447 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
SLC38A9-214ENST00000507447 ABCB7O75027 752 aa16.19■□□□□ 0.18
SLC38A9-214ENST00000507447 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
SLC38A9-214ENST00000507447 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
SLC38A9-214ENST00000507447 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
SLC38A9-214ENST00000507447 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
SLC38A9-214ENST00000507447 APLP2Q06481 763 aa15.78■□□□□ 0.12
SLC38A9-214ENST00000507447 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
SLC38A9-214ENST00000507447 SP7Q8TDD2 431 aaPredicted RBP15.67■□□□□ 0.1
SLC38A9-214ENST00000507447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
SLC38A9-214ENST00000507447 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
SLC38A9-214ENST00000507447 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
SLC38A9-214ENST00000507447 POLA2Q14181 598 aa15.46■□□□□ 0.07
SLC38A9-214ENST00000507447 KCNA4P22459 653 aa15.39■□□□□ 0.05
SLC38A9-214ENST00000507447 PIP4P2Q8N4L2 257 aa15.31■□□□□ 0.04
SLC38A9-214ENST00000507447 HAX1O00165 279 aa15.28■□□□□ 0.04
SLC38A9-214ENST00000507447 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
SLC38A9-214ENST00000507447 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SLC38A9-214ENST00000507447 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
SLC38A9-214ENST00000507447 EVX2Q03828 476 aa15.09■□□□□ 0.01
SLC38A9-214ENST00000507447 PITPNM1O00562 1244 aa15.06■□□□□ 0
SLC38A9-214ENST00000507447 OSCARQ8IYS5 282 aa15.04■□□□□ -0
SLC38A9-214ENST00000507447 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
SLC38A9-214ENST00000507447 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
SLC38A9-214ENST00000507447 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
SLC38A9-214ENST00000507447 LHX8Q68G74 356 aa14.71□□□□□ -0.05
SLC38A9-214ENST00000507447 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
SLC38A9-214ENST00000507447 GABBR2O75899 941 aa14.62□□□□□ -0.07
SLC38A9-214ENST00000507447 PLSCR2Q9NRY7 297 aa14.59□□□□□ -0.07
SLC38A9-214ENST00000507447 C19orf67A6NJJ6 358 aa14.58□□□□□ -0.08
SLC38A9-214ENST00000507447 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
SLC38A9-214ENST00000507447 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
SLC38A9-214ENST00000507447 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
SLC38A9-214ENST00000507447 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
SLC38A9-214ENST00000507447 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
SLC38A9-214ENST00000507447 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
SLC38A9-214ENST00000507447 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
SLC38A9-214ENST00000507447 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
SLC38A9-214ENST00000507447 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
SLC38A9-214ENST00000507447 FBLN2P98095 1184 aa14.29□□□□□ -0.12
SLC38A9-214ENST00000507447 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
SLC38A9-214ENST00000507447 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
SLC38A9-214ENST00000507447 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
SLC38A9-214ENST00000507447 ZBTB22O15209 634 aa14.15□□□□□ -0.14
SLC38A9-214ENST00000507447 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
SLC38A9-214ENST00000507447 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
SLC38A9-214ENST00000507447 DCBLD2Q96PD2 775 aa14.05□□□□□ -0.16
SLC38A9-214ENST00000507447 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
SLC38A9-214ENST00000507447 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
SLC38A9-214ENST00000507447 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
SLC38A9-214ENST00000507447 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
SLC38A9-214ENST00000507447 POTEMA6NI47 508 aa13.93□□□□□ -0.18
SLC38A9-214ENST00000507447 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
SLC38A9-214ENST00000507447 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
SLC38A9-214ENST00000507447 CLCN6P51797 869 aa13.85□□□□□ -0.19
SLC38A9-214ENST00000507447 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
SLC38A9-214ENST00000507447 GALR2O43603 387 aaPredicted RBP13.83□□□□□ -0.2
SLC38A9-214ENST00000507447 ZNF579Q8NAF0 562 aaKnown RBP13.81□□□□□ -0.2
SLC38A9-214ENST00000507447 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
SLC38A9-214ENST00000507447 PHF12Q96QT6 1004 aa13.63□□□□□ -0.23
SLC38A9-214ENST00000507447 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
SLC38A9-214ENST00000507447 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
SLC38A9-214ENST00000507447 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
SLC38A9-214ENST00000507447 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
SLC38A9-214ENST00000507447 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
SLC38A9-214ENST00000507447 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
SLC38A9-214ENST00000507447 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
SLC38A9-214ENST00000507447 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
SLC38A9-214ENST00000507447 ATMINO43313 823 aaPredicted RBP13.37□□□□□ -0.27
SLC38A9-214ENST00000507447 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms