RNA–Protein interactions for RNA: ENST00000506881.5

PTPN20-217, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-217ENST00000506881 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
PTPN20-217ENST00000506881 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
PTPN20-217ENST00000506881 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
PTPN20-217ENST00000506881 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
PTPN20-217ENST00000506881 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
PTPN20-217ENST00000506881 FOXD1Q16676 465 aa18.53■□□□□ 0.56
PTPN20-217ENST00000506881 ADRA2BP18089 450 aa17.87■□□□□ 0.45
PTPN20-217ENST00000506881 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
PTPN20-217ENST00000506881 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
PTPN20-217ENST00000506881 MSH5O43196 834 aa17.06■□□□□ 0.32
PTPN20-217ENST00000506881 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
PTPN20-217ENST00000506881 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
PTPN20-217ENST00000506881 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
PTPN20-217ENST00000506881 KCNA4P22459 653 aa16.07■□□□□ 0.16
PTPN20-217ENST00000506881 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
PTPN20-217ENST00000506881 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
PTPN20-217ENST00000506881 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
PTPN20-217ENST00000506881 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
PTPN20-217ENST00000506881 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
PTPN20-217ENST00000506881 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
PTPN20-217ENST00000506881 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
PTPN20-217ENST00000506881 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
PTPN20-217ENST00000506881 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
PTPN20-217ENST00000506881 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
PTPN20-217ENST00000506881 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
PTPN20-217ENST00000506881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTPN20-217ENST00000506881 SLC4A2P04920 1241 aa14.89□□□□□ -0.03
PTPN20-217ENST00000506881 ZBTB22O15209 634 aa14.77□□□□□ -0.05
PTPN20-217ENST00000506881 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
PTPN20-217ENST00000506881 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
PTPN20-217ENST00000506881 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
PTPN20-217ENST00000506881 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
PTPN20-217ENST00000506881 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
PTPN20-217ENST00000506881 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
PTPN20-217ENST00000506881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
PTPN20-217ENST00000506881 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
PTPN20-217ENST00000506881 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
PTPN20-217ENST00000506881 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
PTPN20-217ENST00000506881 APLP2Q06481 763 aa14.26□□□□□ -0.13
PTPN20-217ENST00000506881 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
PTPN20-217ENST00000506881 CAPN15O75808 1086 aa14.23□□□□□ -0.13
PTPN20-217ENST00000506881 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
PTPN20-217ENST00000506881 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
PTPN20-217ENST00000506881 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-217ENST00000506881 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
PTPN20-217ENST00000506881 ABCB7O75027 752 aa13.97□□□□□ -0.17
PTPN20-217ENST00000506881 DSG3P32926 999 aa13.93□□□□□ -0.18
PTPN20-217ENST00000506881 POLA2Q14181 598 aa13.92□□□□□ -0.18
PTPN20-217ENST00000506881 FBLN2P98095 1184 aa13.6□□□□□ -0.23
PTPN20-217ENST00000506881 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-217ENST00000506881 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
PTPN20-217ENST00000506881 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
PTPN20-217ENST00000506881 FKBP8Q14318 412 aa13.32□□□□□ -0.28
PTPN20-217ENST00000506881 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
PTPN20-217ENST00000506881 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
PTPN20-217ENST00000506881 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
PTPN20-217ENST00000506881 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
PTPN20-217ENST00000506881 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
PTPN20-217ENST00000506881 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
PTPN20-217ENST00000506881 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
PTPN20-217ENST00000506881 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
PTPN20-217ENST00000506881 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPN20-217ENST00000506881 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
PTPN20-217ENST00000506881 PROM2Q8N271 834 aa12.96□□□□□ -0.33
PTPN20-217ENST00000506881 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
PTPN20-217ENST00000506881 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-217ENST00000506881 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
PTPN20-217ENST00000506881 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
PTPN20-217ENST00000506881 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
PTPN20-217ENST00000506881 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
PTPN20-217ENST00000506881 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
PTPN20-217ENST00000506881 MIER1Q8N108 512 aa12.65□□□□□ -0.38
PTPN20-217ENST00000506881 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-217ENST00000506881 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
PTPN20-217ENST00000506881 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPN20-217ENST00000506881 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
PTPN20-217ENST00000506881 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
PTPN20-217ENST00000506881 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
PTPN20-217ENST00000506881 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
PTPN20-217ENST00000506881 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
PTPN20-217ENST00000506881 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
PTPN20-217ENST00000506881 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-217ENST00000506881 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-217ENST00000506881 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-217ENST00000506881 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-217ENST00000506881 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPN20-217ENST00000506881 POTEHQ6S545 545 aa12.35□□□□□ -0.43
PTPN20-217ENST00000506881 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
PTPN20-217ENST00000506881 NUBP1P53384 320 aa12.25□□□□□ -0.45
PTPN20-217ENST00000506881 HAX1O00165 279 aa12.23□□□□□ -0.45
PTPN20-217ENST00000506881 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
PTPN20-217ENST00000506881 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
PTPN20-217ENST00000506881 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
PTPN20-217ENST00000506881 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
PTPN20-217ENST00000506881 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
PTPN20-217ENST00000506881 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
PTPN20-217ENST00000506881 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
PTPN20-217ENST00000506881 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-217ENST00000506881 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
PTPN20-217ENST00000506881 GSE1Q14687 1217 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms