RNA–Protein interactions for RNA: ENST00000506876.5

CCDC110-204, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC110, Length 789 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-204ENST00000506876 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
CCDC110-204ENST00000506876 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
CCDC110-204ENST00000506876 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
CCDC110-204ENST00000506876 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
CCDC110-204ENST00000506876 FOXD1Q16676 465 aa17.68■□□□□ 0.42
CCDC110-204ENST00000506876 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
CCDC110-204ENST00000506876 MSH5O43196 834 aa16.8■□□□□ 0.28
CCDC110-204ENST00000506876 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
CCDC110-204ENST00000506876 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
CCDC110-204ENST00000506876 ADRA2BP18089 450 aa16.01■□□□□ 0.15
CCDC110-204ENST00000506876 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
CCDC110-204ENST00000506876 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
CCDC110-204ENST00000506876 MAPK8IP2Q13387 824 aaPredicted RBP14.87□□□□□ -0.03
CCDC110-204ENST00000506876 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
CCDC110-204ENST00000506876 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
CCDC110-204ENST00000506876 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
CCDC110-204ENST00000506876 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
CCDC110-204ENST00000506876 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
CCDC110-204ENST00000506876 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.17
CCDC110-204ENST00000506876 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
CCDC110-204ENST00000506876 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
CCDC110-204ENST00000506876 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
CCDC110-204ENST00000506876 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
CCDC110-204ENST00000506876 POTEHQ6S545 545 aa13.53□□□□□ -0.24
CCDC110-204ENST00000506876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC110-204ENST00000506876 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
CCDC110-204ENST00000506876 CAPN15O75808 1086 aa13.15□□□□□ -0.3
CCDC110-204ENST00000506876 DSG3P32926 999 aa13.15□□□□□ -0.3
CCDC110-204ENST00000506876 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
CCDC110-204ENST00000506876 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
CCDC110-204ENST00000506876 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
CCDC110-204ENST00000506876 ABCB7O75027 752 aa12.8□□□□□ -0.36
CCDC110-204ENST00000506876 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
CCDC110-204ENST00000506876 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
CCDC110-204ENST00000506876 APLP2Q06481 763 aa12.71□□□□□ -0.37
CCDC110-204ENST00000506876 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
CCDC110-204ENST00000506876 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
CCDC110-204ENST00000506876 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
CCDC110-204ENST00000506876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
CCDC110-204ENST00000506876 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
CCDC110-204ENST00000506876 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
CCDC110-204ENST00000506876 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
CCDC110-204ENST00000506876 POLA2Q14181 598 aa12.29□□□□□ -0.44
CCDC110-204ENST00000506876 KCNA4P22459 653 aa12.27□□□□□ -0.45
CCDC110-204ENST00000506876 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
CCDC110-204ENST00000506876 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
CCDC110-204ENST00000506876 HAX1O00165 279 aa12.1□□□□□ -0.47
CCDC110-204ENST00000506876 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
CCDC110-204ENST00000506876 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
CCDC110-204ENST00000506876 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
CCDC110-204ENST00000506876 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
CCDC110-204ENST00000506876 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
CCDC110-204ENST00000506876 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC110-204ENST00000506876 EVX2Q03828 476 aa11.85□□□□□ -0.51
CCDC110-204ENST00000506876 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
CCDC110-204ENST00000506876 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
CCDC110-204ENST00000506876 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
CCDC110-204ENST00000506876 LHX8Q68G74 356 aa11.63□□□□□ -0.55
CCDC110-204ENST00000506876 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
CCDC110-204ENST00000506876 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
CCDC110-204ENST00000506876 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
CCDC110-204ENST00000506876 GABBR2O75899 941 aa11.56□□□□□ -0.56
CCDC110-204ENST00000506876 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
CCDC110-204ENST00000506876 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
CCDC110-204ENST00000506876 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
CCDC110-204ENST00000506876 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
CCDC110-204ENST00000506876 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
CCDC110-204ENST00000506876 FBLN2P98095 1184 aa11.47□□□□□ -0.57
CCDC110-204ENST00000506876 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
CCDC110-204ENST00000506876 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
CCDC110-204ENST00000506876 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
CCDC110-204ENST00000506876 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
CCDC110-204ENST00000506876 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
CCDC110-204ENST00000506876 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
CCDC110-204ENST00000506876 ZBTB22O15209 634 aa11.25□□□□□ -0.61
CCDC110-204ENST00000506876 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
CCDC110-204ENST00000506876 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
CCDC110-204ENST00000506876 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
CCDC110-204ENST00000506876 CLCN6P51797 869 aa11.16□□□□□ -0.62
CCDC110-204ENST00000506876 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCDC110-204ENST00000506876 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
CCDC110-204ENST00000506876 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
CCDC110-204ENST00000506876 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
CCDC110-204ENST00000506876 OTUD5Q96G74 571 aa11.01□□□□□ -0.65
CCDC110-204ENST00000506876 POTEMA6NI47 508 aa11□□□□□ -0.65
CCDC110-204ENST00000506876 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
CCDC110-204ENST00000506876 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
CCDC110-204ENST00000506876 POTEGQ6S5H5 508 aa10.94□□□□□ -0.66
CCDC110-204ENST00000506876 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
CCDC110-204ENST00000506876 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
CCDC110-204ENST00000506876 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
CCDC110-204ENST00000506876 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
CCDC110-204ENST00000506876 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
CCDC110-204ENST00000506876 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
CCDC110-204ENST00000506876 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
CCDC110-204ENST00000506876 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
CCDC110-204ENST00000506876 METRNQ9UJH8 293 aa10.72□□□□□ -0.69
CCDC110-204ENST00000506876 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
CCDC110-204ENST00000506876 SLC39A7Q92504 469 aa10.66□□□□□ -0.7
CCDC110-204ENST00000506876 POTEJP0CG39 1038 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms