RNA–Protein interactions for RNA: ENST00000506457.1

PACRGL-212, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 223 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-212ENST00000506457 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
PACRGL-212ENST00000506457 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
PACRGL-212ENST00000506457 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
PACRGL-212ENST00000506457 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
PACRGL-212ENST00000506457 FOXD1Q16676 465 aa23.34■■□□□ 1.33
PACRGL-212ENST00000506457 POTEDQ86YR6 584 aa22.77■■□□□ 1.24
PACRGL-212ENST00000506457 MSH5O43196 834 aa22■■□□□ 1.11
PACRGL-212ENST00000506457 PIAS4Q8N2W9 510 aaPredicted RBP21.6■■□□□ 1.05
PACRGL-212ENST00000506457 PPP6R1Q9UPN7 881 aa21.33■■□□□ 1.01
PACRGL-212ENST00000506457 ADRA2BP18089 450 aa21.2■□□□□ 0.98
PACRGL-212ENST00000506457 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
PACRGL-212ENST00000506457 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
PACRGL-212ENST00000506457 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
PACRGL-212ENST00000506457 CACNB1Q02641 598 aaPredicted RBP19.36■□□□□ 0.69
PACRGL-212ENST00000506457 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
PACRGL-212ENST00000506457 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
PACRGL-212ENST00000506457 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
PACRGL-212ENST00000506457 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
PACRGL-212ENST00000506457 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
PACRGL-212ENST00000506457 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
PACRGL-212ENST00000506457 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
PACRGL-212ENST00000506457 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
PACRGL-212ENST00000506457 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
PACRGL-212ENST00000506457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
PACRGL-212ENST00000506457 POTEHQ6S545 545 aa17.68■□□□□ 0.42
PACRGL-212ENST00000506457 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
PACRGL-212ENST00000506457 DSG3P32926 999 aa17.36■□□□□ 0.37
PACRGL-212ENST00000506457 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
PACRGL-212ENST00000506457 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
PACRGL-212ENST00000506457 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
PACRGL-212ENST00000506457 CAPN15O75808 1086 aa17.27■□□□□ 0.36
PACRGL-212ENST00000506457 ABCB7O75027 752 aa16.85■□□□□ 0.29
PACRGL-212ENST00000506457 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
PACRGL-212ENST00000506457 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
PACRGL-212ENST00000506457 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
PACRGL-212ENST00000506457 APLP2Q06481 763 aa16.61■□□□□ 0.25
PACRGL-212ENST00000506457 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
PACRGL-212ENST00000506457 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
PACRGL-212ENST00000506457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PACRGL-212ENST00000506457 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
PACRGL-212ENST00000506457 KCNA4P22459 653 aa16.41■□□□□ 0.22
PACRGL-212ENST00000506457 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
PACRGL-212ENST00000506457 POLA2Q14181 598 aa16.23■□□□□ 0.19
PACRGL-212ENST00000506457 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
PACRGL-212ENST00000506457 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
PACRGL-212ENST00000506457 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
PACRGL-212ENST00000506457 PIP4P2Q8N4L2 257 aa15.95■□□□□ 0.14
PACRGL-212ENST00000506457 REM2Q8IYK8 340 aaPredicted RBP15.89■□□□□ 0.13
PACRGL-212ENST00000506457 HAX1O00165 279 aa15.84■□□□□ 0.13
PACRGL-212ENST00000506457 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
PACRGL-212ENST00000506457 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
PACRGL-212ENST00000506457 PITPNM1O00562 1244 aa15.74■□□□□ 0.11
PACRGL-212ENST00000506457 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
PACRGL-212ENST00000506457 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
PACRGL-212ENST00000506457 EVX2Q03828 476 aa15.69■□□□□ 0.1
PACRGL-212ENST00000506457 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
PACRGL-212ENST00000506457 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
PACRGL-212ENST00000506457 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
PACRGL-212ENST00000506457 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
PACRGL-212ENST00000506457 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
PACRGL-212ENST00000506457 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
PACRGL-212ENST00000506457 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
PACRGL-212ENST00000506457 GABBR2O75899 941 aa15.22■□□□□ 0.03
PACRGL-212ENST00000506457 LHX8Q68G74 356 aa15.22■□□□□ 0.03
PACRGL-212ENST00000506457 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
PACRGL-212ENST00000506457 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
PACRGL-212ENST00000506457 ZBTB22O15209 634 aa15.1■□□□□ 0.01
PACRGL-212ENST00000506457 FBLN2P98095 1184 aa15.08■□□□□ 0
PACRGL-212ENST00000506457 CHADLQ6NUI6 762 aa15.05■□□□□ -0
PACRGL-212ENST00000506457 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
PACRGL-212ENST00000506457 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
PACRGL-212ENST00000506457 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
PACRGL-212ENST00000506457 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
PACRGL-212ENST00000506457 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
PACRGL-212ENST00000506457 PLSCR2Q9NRY7 297 aa14.85□□□□□ -0.03
PACRGL-212ENST00000506457 PRR29P0C7W0 189 aa14.83□□□□□ -0.04
PACRGL-212ENST00000506457 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
PACRGL-212ENST00000506457 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
PACRGL-212ENST00000506457 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
PACRGL-212ENST00000506457 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
PACRGL-212ENST00000506457 CLCN6P51797 869 aa14.59□□□□□ -0.07
PACRGL-212ENST00000506457 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
PACRGL-212ENST00000506457 OTUD5Q96G74 571 aa14.49□□□□□ -0.09
PACRGL-212ENST00000506457 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
PACRGL-212ENST00000506457 POTEB2H3BUK9 544 aa14.45□□□□□ -0.1
PACRGL-212ENST00000506457 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
PACRGL-212ENST00000506457 POTEMA6NI47 508 aa14.38□□□□□ -0.11
PACRGL-212ENST00000506457 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
PACRGL-212ENST00000506457 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
PACRGL-212ENST00000506457 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
PACRGL-212ENST00000506457 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
PACRGL-212ENST00000506457 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
PACRGL-212ENST00000506457 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
PACRGL-212ENST00000506457 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
PACRGL-212ENST00000506457 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
PACRGL-212ENST00000506457 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
PACRGL-212ENST00000506457 LCE2DQ5TA82 110 aaPredicted RBP14.06□□□□□ -0.16
PACRGL-212ENST00000506457 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
PACRGL-212ENST00000506457 MS4A3Q96HJ5 214 aa14.02□□□□□ -0.17
PACRGL-212ENST00000506457 ATMINO43313 823 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms