RNA–Protein interactions for RNA: ENST00000505327.1

FRG1-202, Transcript of FSHD region gene 1, humanhuman

TSL 2

Gene FRG1, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-202ENST00000505327 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
FRG1-202ENST00000505327 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
FRG1-202ENST00000505327 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
FRG1-202ENST00000505327 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
FRG1-202ENST00000505327 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
FRG1-202ENST00000505327 FOXD1Q16676 465 aa19.17■□□□□ 0.66
FRG1-202ENST00000505327 MSH5O43196 834 aa18.3■□□□□ 0.52
FRG1-202ENST00000505327 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
FRG1-202ENST00000505327 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
FRG1-202ENST00000505327 ADRA2BP18089 450 aa17.04■□□□□ 0.32
FRG1-202ENST00000505327 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
FRG1-202ENST00000505327 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
FRG1-202ENST00000505327 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
FRG1-202ENST00000505327 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
FRG1-202ENST00000505327 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
FRG1-202ENST00000505327 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
FRG1-202ENST00000505327 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
FRG1-202ENST00000505327 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
FRG1-202ENST00000505327 POTEHQ6S545 545 aa15.12■□□□□ 0.01
FRG1-202ENST00000505327 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
FRG1-202ENST00000505327 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
FRG1-202ENST00000505327 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
FRG1-202ENST00000505327 PPP4R3CPQ6ZMV5 832 aa14.62□□□□□ -0.07
FRG1-202ENST00000505327 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
FRG1-202ENST00000505327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
FRG1-202ENST00000505327 DSG3P32926 999 aa14.23□□□□□ -0.13
FRG1-202ENST00000505327 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
FRG1-202ENST00000505327 CAPN15O75808 1086 aa14.02□□□□□ -0.17
FRG1-202ENST00000505327 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
FRG1-202ENST00000505327 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
FRG1-202ENST00000505327 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
FRG1-202ENST00000505327 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
FRG1-202ENST00000505327 ABCB7O75027 752 aa13.62□□□□□ -0.23
FRG1-202ENST00000505327 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
FRG1-202ENST00000505327 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
FRG1-202ENST00000505327 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
FRG1-202ENST00000505327 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
FRG1-202ENST00000505327 APLP2Q06481 763 aa13.42□□□□□ -0.26
FRG1-202ENST00000505327 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
FRG1-202ENST00000505327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
FRG1-202ENST00000505327 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
FRG1-202ENST00000505327 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
FRG1-202ENST00000505327 HAX1O00165 279 aa13.14□□□□□ -0.31
FRG1-202ENST00000505327 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
FRG1-202ENST00000505327 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
FRG1-202ENST00000505327 POLA2Q14181 598 aa13□□□□□ -0.33
FRG1-202ENST00000505327 EVX2Q03828 476 aa12.95□□□□□ -0.34
FRG1-202ENST00000505327 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
FRG1-202ENST00000505327 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
FRG1-202ENST00000505327 LHX8Q68G74 356 aa12.84□□□□□ -0.35
FRG1-202ENST00000505327 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
FRG1-202ENST00000505327 PLSCR2Q9NRY7 297 aa12.82□□□□□ -0.36
FRG1-202ENST00000505327 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
FRG1-202ENST00000505327 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
FRG1-202ENST00000505327 GABBR2O75899 941 aa12.59□□□□□ -0.39
FRG1-202ENST00000505327 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
FRG1-202ENST00000505327 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
FRG1-202ENST00000505327 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
FRG1-202ENST00000505327 KCNA4P22459 653 aa12.41□□□□□ -0.42
FRG1-202ENST00000505327 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
FRG1-202ENST00000505327 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
FRG1-202ENST00000505327 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
FRG1-202ENST00000505327 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
FRG1-202ENST00000505327 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
FRG1-202ENST00000505327 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
FRG1-202ENST00000505327 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
FRG1-202ENST00000505327 POTEMA6NI47 508 aa12.15□□□□□ -0.46
FRG1-202ENST00000505327 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
FRG1-202ENST00000505327 CLCN6P51797 869 aa12.07□□□□□ -0.48
FRG1-202ENST00000505327 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
FRG1-202ENST00000505327 OTUD5Q96G74 571 aa12.06□□□□□ -0.48
FRG1-202ENST00000505327 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
FRG1-202ENST00000505327 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
FRG1-202ENST00000505327 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
FRG1-202ENST00000505327 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
FRG1-202ENST00000505327 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
FRG1-202ENST00000505327 FBLN2P98095 1184 aa11.9□□□□□ -0.5
FRG1-202ENST00000505327 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
FRG1-202ENST00000505327 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
FRG1-202ENST00000505327 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
FRG1-202ENST00000505327 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
FRG1-202ENST00000505327 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
FRG1-202ENST00000505327 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
FRG1-202ENST00000505327 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
FRG1-202ENST00000505327 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
FRG1-202ENST00000505327 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
FRG1-202ENST00000505327 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
FRG1-202ENST00000505327 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
FRG1-202ENST00000505327 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
FRG1-202ENST00000505327 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
FRG1-202ENST00000505327 FAM163AQ96GL9 167 aaPredicted RBP11.56□□□□□ -0.56
FRG1-202ENST00000505327 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
FRG1-202ENST00000505327 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
FRG1-202ENST00000505327 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
FRG1-202ENST00000505327 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
FRG1-202ENST00000505327 C7P10643 843 aa11.43□□□□□ -0.58
FRG1-202ENST00000505327 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
FRG1-202ENST00000505327 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
FRG1-202ENST00000505327 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
FRG1-202ENST00000505327 ZBTB22O15209 634 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms