RNA–Protein interactions for RNA: ENST00000503661.5

PRDM5-205, Transcript of PR/SET domain 5, humanhuman

TSL 3

Gene PRDM5, Length 847 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-205ENST00000503661 AEBP2Q6ZN18 517 aaPredicted RBP33.09■■■□□ 2.89
PRDM5-205ENST00000503661 CHIC1Q5VXU3 224 aa30.81■■■□□ 2.52
PRDM5-205ENST00000503661 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
PRDM5-205ENST00000503661 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
PRDM5-205ENST00000503661 FOXD1Q16676 465 aa26.51■■□□□ 1.83
PRDM5-205ENST00000503661 POTEDQ86YR6 584 aa25.98■■□□□ 1.75
PRDM5-205ENST00000503661 MSH5O43196 834 aa25.09■■□□□ 1.61
PRDM5-205ENST00000503661 PIAS4Q8N2W9 510 aaPredicted RBP24.51■■□□□ 1.51
PRDM5-205ENST00000503661 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
PRDM5-205ENST00000503661 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
PRDM5-205ENST00000503661 ADRA2BP18089 450 aa23.98■■□□□ 1.43
PRDM5-205ENST00000503661 DMRT2Q9Y5R5 561 aa22.34■■□□□ 1.17
PRDM5-205ENST00000503661 MAPK8IP2Q13387 824 aaPredicted RBP22.29■■□□□ 1.16
PRDM5-205ENST00000503661 CACNB1Q02641 598 aaPredicted RBP22.01■■□□□ 1.11
PRDM5-205ENST00000503661 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
PRDM5-205ENST00000503661 RNF39Q9H2S5 420 aa21.39■■□□□ 1.01
PRDM5-205ENST00000503661 DCAF8L1A6NGE4 600 aa21.32■■□□□ 1
PRDM5-205ENST00000503661 HOXD11P31277 338 aaPredicted RBP21.2■□□□□ 0.98
PRDM5-205ENST00000503661 C1QBPQ07021 282 aaKnown RBP20.98■□□□□ 0.95
PRDM5-205ENST00000503661 PPP4R3CPQ6ZMV5 832 aa20.92■□□□□ 0.94
PRDM5-205ENST00000503661 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
PRDM5-205ENST00000503661 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
PRDM5-205ENST00000503661 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
PRDM5-205ENST00000503661 POTEHQ6S545 545 aa20.16■□□□□ 0.82
PRDM5-205ENST00000503661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
PRDM5-205ENST00000503661 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
PRDM5-205ENST00000503661 DSG3P32926 999 aa19.72■□□□□ 0.75
PRDM5-205ENST00000503661 U3KPZ7 1027 aaPredicted RBP19.66■□□□□ 0.74
PRDM5-205ENST00000503661 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
PRDM5-205ENST00000503661 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
PRDM5-205ENST00000503661 CAPN15O75808 1086 aa19.54■□□□□ 0.72
PRDM5-205ENST00000503661 ABCB7O75027 752 aa19.04■□□□□ 0.64
PRDM5-205ENST00000503661 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
PRDM5-205ENST00000503661 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
PRDM5-205ENST00000503661 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
PRDM5-205ENST00000503661 APLP2Q06481 763 aa18.91■□□□□ 0.62
PRDM5-205ENST00000503661 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
PRDM5-205ENST00000503661 CHRDL2Q6WN34 429 aa18.74■□□□□ 0.59
PRDM5-205ENST00000503661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
PRDM5-205ENST00000503661 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
PRDM5-205ENST00000503661 SAMD1Q6SPF0 538 aaPredicted RBP18.6■□□□□ 0.57
PRDM5-205ENST00000503661 SP7Q8TDD2 431 aaPredicted RBP18.51■□□□□ 0.55
PRDM5-205ENST00000503661 KCNA4P22459 653 aa18.45■□□□□ 0.54
PRDM5-205ENST00000503661 POLA2Q14181 598 aa18.36■□□□□ 0.53
PRDM5-205ENST00000503661 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
PRDM5-205ENST00000503661 PIP4P2Q8N4L2 257 aa18.13■□□□□ 0.49
PRDM5-205ENST00000503661 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
PRDM5-205ENST00000503661 REM2Q8IYK8 340 aaPredicted RBP18.03■□□□□ 0.48
PRDM5-205ENST00000503661 HAX1O00165 279 aa17.95■□□□□ 0.46
PRDM5-205ENST00000503661 FXR2P51116 673 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRDM5-205ENST00000503661 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
PRDM5-205ENST00000503661 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
PRDM5-205ENST00000503661 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
PRDM5-205ENST00000503661 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
PRDM5-205ENST00000503661 EVX2Q03828 476 aa17.77■□□□□ 0.44
PRDM5-205ENST00000503661 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
PRDM5-205ENST00000503661 C19orf67A6NJJ6 358 aa17.36■□□□□ 0.37
PRDM5-205ENST00000503661 PRKAR2AP13861 404 aaKnown RBP17.35■□□□□ 0.37
PRDM5-205ENST00000503661 LHX8Q68G74 356 aa17.33■□□□□ 0.36
PRDM5-205ENST00000503661 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
PRDM5-205ENST00000503661 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
PRDM5-205ENST00000503661 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
PRDM5-205ENST00000503661 GABBR2O75899 941 aa17.28■□□□□ 0.36
PRDM5-205ENST00000503661 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
PRDM5-205ENST00000503661 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
PRDM5-205ENST00000503661 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
PRDM5-205ENST00000503661 FBLN2P98095 1184 aa17.07■□□□□ 0.32
PRDM5-205ENST00000503661 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
PRDM5-205ENST00000503661 SSUH2Q9Y2M2 353 aa17.03■□□□□ 0.32
PRDM5-205ENST00000503661 ZBTB22O15209 634 aa17.01■□□□□ 0.31
PRDM5-205ENST00000503661 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
PRDM5-205ENST00000503661 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
PRDM5-205ENST00000503661 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
PRDM5-205ENST00000503661 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
PRDM5-205ENST00000503661 PLSCR2Q9NRY7 297 aa16.85■□□□□ 0.29
PRDM5-205ENST00000503661 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
PRDM5-205ENST00000503661 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
PRDM5-205ENST00000503661 CLCN6P51797 869 aa16.71■□□□□ 0.27
PRDM5-205ENST00000503661 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRDM5-205ENST00000503661 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
PRDM5-205ENST00000503661 DCBLD2Q96PD2 775 aa16.56■□□□□ 0.24
PRDM5-205ENST00000503661 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
PRDM5-205ENST00000503661 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
PRDM5-205ENST00000503661 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
PRDM5-205ENST00000503661 POTEMA6NI47 508 aa16.36■□□□□ 0.21
PRDM5-205ENST00000503661 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
PRDM5-205ENST00000503661 GALR2O43603 387 aaPredicted RBP16.34■□□□□ 0.21
PRDM5-205ENST00000503661 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
PRDM5-205ENST00000503661 CREBZFQ9NS37 354 aa16.24■□□□□ 0.19
PRDM5-205ENST00000503661 PCDH10Q9P2E7 1040 aa16.14■□□□□ 0.17
PRDM5-205ENST00000503661 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
PRDM5-205ENST00000503661 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
PRDM5-205ENST00000503661 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
PRDM5-205ENST00000503661 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
PRDM5-205ENST00000503661 LCE2DQ5TA82 110 aaPredicted RBP16■□□□□ 0.15
PRDM5-205ENST00000503661 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
PRDM5-205ENST00000503661 ASTLQ6HA08 431 aaPredicted RBP15.97■□□□□ 0.15
PRDM5-205ENST00000503661 METRNQ9UJH8 293 aa15.96■□□□□ 0.15
PRDM5-205ENST00000503661 ATMINO43313 823 aaPredicted RBP15.9■□□□□ 0.14
PRDM5-205ENST00000503661 C7P10643 843 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms