RNA–Protein interactions for RNA: ENST00000503208.1

LINC00616-201, long intergenic non-protein coding RNA 616, humanhuman

TSL 5

Gene LINC00616, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-201ENST00000503208 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
LINC00616-201ENST00000503208 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
LINC00616-201ENST00000503208 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
LINC00616-201ENST00000503208 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
LINC00616-201ENST00000503208 FOXD1Q16676 465 aa15.68■□□□□ 0.1
LINC00616-201ENST00000503208 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
LINC00616-201ENST00000503208 MSH5O43196 834 aa14.88□□□□□ -0.03
LINC00616-201ENST00000503208 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
LINC00616-201ENST00000503208 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
LINC00616-201ENST00000503208 ADRA2BP18089 450 aa14.09□□□□□ -0.15
LINC00616-201ENST00000503208 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
LINC00616-201ENST00000503208 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
LINC00616-201ENST00000503208 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
LINC00616-201ENST00000503208 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
LINC00616-201ENST00000503208 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
LINC00616-201ENST00000503208 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
LINC00616-201ENST00000503208 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
LINC00616-201ENST00000503208 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
LINC00616-201ENST00000503208 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
LINC00616-201ENST00000503208 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
LINC00616-201ENST00000503208 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
LINC00616-201ENST00000503208 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
LINC00616-201ENST00000503208 POTEHQ6S545 545 aa12.11□□□□□ -0.47
LINC00616-201ENST00000503208 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
LINC00616-201ENST00000503208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00616-201ENST00000503208 DSG3P32926 999 aa11.65□□□□□ -0.54
LINC00616-201ENST00000503208 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
LINC00616-201ENST00000503208 CAPN15O75808 1086 aa11.54□□□□□ -0.56
LINC00616-201ENST00000503208 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
LINC00616-201ENST00000503208 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
LINC00616-201ENST00000503208 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
LINC00616-201ENST00000503208 ABCB7O75027 752 aa11.23□□□□□ -0.61
LINC00616-201ENST00000503208 TRHP20396 242 aaPredicted RBP11.2□□□□□ -0.62
LINC00616-201ENST00000503208 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
LINC00616-201ENST00000503208 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
LINC00616-201ENST00000503208 KCNA4P22459 653 aa11.11□□□□□ -0.63
LINC00616-201ENST00000503208 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
LINC00616-201ENST00000503208 APLP2Q06481 763 aa11.08□□□□□ -0.64
LINC00616-201ENST00000503208 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
LINC00616-201ENST00000503208 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
LINC00616-201ENST00000503208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
LINC00616-201ENST00000503208 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
LINC00616-201ENST00000503208 SAMD1Q6SPF0 538 aaPredicted RBP10.85□□□□□ -0.67
LINC00616-201ENST00000503208 POLA2Q14181 598 aa10.76□□□□□ -0.69
LINC00616-201ENST00000503208 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
LINC00616-201ENST00000503208 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
LINC00616-201ENST00000503208 HAX1O00165 279 aa10.69□□□□□ -0.7
LINC00616-201ENST00000503208 REM2Q8IYK8 340 aaPredicted RBP10.63□□□□□ -0.71
LINC00616-201ENST00000503208 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC00616-201ENST00000503208 EVX2Q03828 476 aa10.56□□□□□ -0.72
LINC00616-201ENST00000503208 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
LINC00616-201ENST00000503208 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
LINC00616-201ENST00000503208 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
LINC00616-201ENST00000503208 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
LINC00616-201ENST00000503208 OSCARQ8IYS5 282 aa10.46□□□□□ -0.73
LINC00616-201ENST00000503208 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
LINC00616-201ENST00000503208 LHX8Q68G74 356 aa10.36□□□□□ -0.75
LINC00616-201ENST00000503208 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
LINC00616-201ENST00000503208 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
LINC00616-201ENST00000503208 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
LINC00616-201ENST00000503208 GABBR2O75899 941 aa10.26□□□□□ -0.77
LINC00616-201ENST00000503208 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
LINC00616-201ENST00000503208 ZBTB22O15209 634 aa10.23□□□□□ -0.77
LINC00616-201ENST00000503208 SPDYE2BA6NHP3 402 aa10.11□□□□□ -0.79
LINC00616-201ENST00000503208 SPDYE6P0CI01 402 aa10.11□□□□□ -0.79
LINC00616-201ENST00000503208 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
LINC00616-201ENST00000503208 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
LINC00616-201ENST00000503208 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
LINC00616-201ENST00000503208 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
LINC00616-201ENST00000503208 POTEIP0CG38 1075 aa10.06□□□□□ -0.8
LINC00616-201ENST00000503208 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
LINC00616-201ENST00000503208 CHADLQ6NUI6 762 aa10□□□□□ -0.81
LINC00616-201ENST00000503208 FBLN2P98095 1184 aa9.95□□□□□ -0.82
LINC00616-201ENST00000503208 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
LINC00616-201ENST00000503208 ATXN8OSP0DMR3 200 aa9.91□□□□□ -0.82
LINC00616-201ENST00000503208 ZNF692Q9BU19 519 aaPredicted RBP9.89□□□□□ -0.83
LINC00616-201ENST00000503208 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
LINC00616-201ENST00000503208 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
LINC00616-201ENST00000503208 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
LINC00616-201ENST00000503208 CLCN6P51797 869 aa9.84□□□□□ -0.83
LINC00616-201ENST00000503208 DCBLD2Q96PD2 775 aa9.81□□□□□ -0.84
LINC00616-201ENST00000503208 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
LINC00616-201ENST00000503208 POTEMA6NI47 508 aa9.79□□□□□ -0.84
LINC00616-201ENST00000503208 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
LINC00616-201ENST00000503208 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
LINC00616-201ENST00000503208 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00616-201ENST00000503208 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
LINC00616-201ENST00000503208 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
LINC00616-201ENST00000503208 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
LINC00616-201ENST00000503208 PCDH10Q9P2E7 1040 aa9.64□□□□□ -0.87
LINC00616-201ENST00000503208 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
LINC00616-201ENST00000503208 PELP1Q8IZL8 1130 aaKnown RBP9.53□□□□□ -0.88
LINC00616-201ENST00000503208 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
LINC00616-201ENST00000503208 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
LINC00616-201ENST00000503208 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
LINC00616-201ENST00000503208 PHF12Q96QT6 1004 aa9.47□□□□□ -0.89
LINC00616-201ENST00000503208 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
LINC00616-201ENST00000503208 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
LINC00616-201ENST00000503208 ASTLQ6HA08 431 aaPredicted RBP9.39□□□□□ -0.91
LINC00616-201ENST00000503208 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms