RNA–Protein interactions for RNA: ENST00000502839.1

LRBA-202, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 3

Gene LRBA, Length 814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-202ENST00000502839 AEBP2Q6ZN18 517 aaPredicted RBP36.12■■■■□ 3.37
LRBA-202ENST00000502839 CHIC1Q5VXU3 224 aa35.26■■■■□ 3.24
LRBA-202ENST00000502839 PHF23Q9BUL5 403 aaPredicted RBP30.99■■■□□ 2.55
LRBA-202ENST00000502839 SENP3Q9H4L4 574 aaPredicted RBP30.68■■■□□ 2.5
LRBA-202ENST00000502839 PLPPR3Q6T4P5 718 aa28.59■■■□□ 2.17
LRBA-202ENST00000502839 FOXD1Q16676 465 aa28.45■■■□□ 2.14
LRBA-202ENST00000502839 PPP6R1Q9UPN7 881 aa27.33■■□□□ 1.97
LRBA-202ENST00000502839 ADRA2BP18089 450 aa27.24■■□□□ 1.95
LRBA-202ENST00000502839 PIAS4Q8N2W9 510 aaPredicted RBP26.74■■□□□ 1.87
LRBA-202ENST00000502839 MSH5O43196 834 aa26.29■■□□□ 1.8
LRBA-202ENST00000502839 PPP4R3CPQ6ZMV5 832 aa25.14■■□□□ 1.62
LRBA-202ENST00000502839 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
LRBA-202ENST00000502839 MAPK8IP2Q13387 824 aaPredicted RBP24.73■■□□□ 1.55
LRBA-202ENST00000502839 CNKSR2Q8WXI2 1034 aa24.5■■□□□ 1.51
LRBA-202ENST00000502839 DMRT2Q9Y5R5 561 aa24.5■■□□□ 1.51
LRBA-202ENST00000502839 NCBP3Q53F19 620 aaKnown RBP24.48■■□□□ 1.51
LRBA-202ENST00000502839 KCNA4P22459 653 aa24.47■■□□□ 1.51
LRBA-202ENST00000502839 NPM3O75607 178 aaKnown RBP24.12■■□□□ 1.45
LRBA-202ENST00000502839 POTEDQ86YR6 584 aa24.09■■□□□ 1.45
LRBA-202ENST00000502839 RNF216Q9NWF9 866 aaPredicted RBP24.07■■□□□ 1.44
LRBA-202ENST00000502839 HOXD11P31277 338 aaPredicted RBP24.03■■□□□ 1.44
LRBA-202ENST00000502839 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
LRBA-202ENST00000502839 SLC4A1APQ9BWU0 796 aaKnown RBP23.28■■□□□ 1.32
LRBA-202ENST00000502839 DCAF8L1A6NGE4 600 aa23.18■■□□□ 1.3
LRBA-202ENST00000502839 SLC4A2P04920 1241 aa22.83■■□□□ 1.25
LRBA-202ENST00000502839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.23
LRBA-202ENST00000502839 FOXD4L1Q9NU39 408 aa22.57■■□□□ 1.2
LRBA-202ENST00000502839 ZBTB22O15209 634 aa22.55■■□□□ 1.2
LRBA-202ENST00000502839 RNF39Q9H2S5 420 aa22.55■■□□□ 1.2
LRBA-202ENST00000502839 U3KPZ7 1027 aaPredicted RBP22.42■■□□□ 1.18
LRBA-202ENST00000502839 EHMT2Q96KQ7 1210 aa22.41■■□□□ 1.18
LRBA-202ENST00000502839 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
LRBA-202ENST00000502839 MYCNP04198 464 aaPredicted RBP22.3■■□□□ 1.16
LRBA-202ENST00000502839 C1QBPQ07021 282 aaKnown RBP22.28■■□□□ 1.16
LRBA-202ENST00000502839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
LRBA-202ENST00000502839 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
LRBA-202ENST00000502839 SAMD1Q6SPF0 538 aaPredicted RBP22.07■■□□□ 1.12
LRBA-202ENST00000502839 APLP2Q06481 763 aa21.92■■□□□ 1.1
LRBA-202ENST00000502839 ATXN8OSP0DMR3 200 aa21.91■■□□□ 1.1
LRBA-202ENST00000502839 CACNB1Q02641 598 aaPredicted RBP21.86■■□□□ 1.09
LRBA-202ENST00000502839 SPINK5Q9NQ38 1064 aaPredicted RBP21.75■■□□□ 1.07
LRBA-202ENST00000502839 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
LRBA-202ENST00000502839 CAPN15O75808 1086 aa21.61■■□□□ 1.05
LRBA-202ENST00000502839 ZNF219Q9P2Y4 722 aaPredicted RBP21.61■■□□□ 1.05
LRBA-202ENST00000502839 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
LRBA-202ENST00000502839 DSG3P32926 999 aa21.4■■□□□ 1.02
LRBA-202ENST00000502839 POLA2Q14181 598 aa21.2■□□□□ 0.98
LRBA-202ENST00000502839 ABCB7O75027 752 aa21.16■□□□□ 0.98
LRBA-202ENST00000502839 ZBTB12Q9Y330 459 aaPredicted RBP20.93■□□□□ 0.94
LRBA-202ENST00000502839 MKRN4PQ13434 485 aaPredicted RBP20.76■□□□□ 0.91
LRBA-202ENST00000502839 FBLN2P98095 1184 aa20.74■□□□□ 0.91
LRBA-202ENST00000502839 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
LRBA-202ENST00000502839 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
LRBA-202ENST00000502839 SPDYE2BA6NHP3 402 aa20.37■□□□□ 0.85
LRBA-202ENST00000502839 SPDYE6P0CI01 402 aa20.37■□□□□ 0.85
LRBA-202ENST00000502839 SPDYE2Q495Y8 402 aa20.37■□□□□ 0.85
LRBA-202ENST00000502839 SSUH2Q9Y2M2 353 aa20.24■□□□□ 0.83
LRBA-202ENST00000502839 SPDYE4A6NLX3 237 aa20.22■□□□□ 0.83
LRBA-202ENST00000502839 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
LRBA-202ENST00000502839 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
LRBA-202ENST00000502839 FKBP8Q14318 412 aa20.12■□□□□ 0.81
LRBA-202ENST00000502839 PROM2Q8N271 834 aa20.07■□□□□ 0.8
LRBA-202ENST00000502839 REM2Q8IYK8 340 aaPredicted RBP19.92■□□□□ 0.78
LRBA-202ENST00000502839 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
LRBA-202ENST00000502839 SPDYE1Q8NFV5 336 aaPredicted RBP19.74■□□□□ 0.75
LRBA-202ENST00000502839 PITPNM1O00562 1244 aa19.66■□□□□ 0.74
LRBA-202ENST00000502839 STAG3Q9UJ98 1225 aa19.66■□□□□ 0.74
LRBA-202ENST00000502839 CHRDL2Q6WN34 429 aa19.53■□□□□ 0.72
LRBA-202ENST00000502839 FBXO3Q9UK99 471 aa19.53■□□□□ 0.72
LRBA-202ENST00000502839 CLEC11AQ9Y240 323 aa19.5■□□□□ 0.71
LRBA-202ENST00000502839 PRR29P0C7W0 189 aa19.41■□□□□ 0.7
LRBA-202ENST00000502839 FXR2P51116 673 aaKnown RBP eCLIP19.39■□□□□ 0.69
LRBA-202ENST00000502839 PIP4P2Q8N4L2 257 aa19.27■□□□□ 0.68
LRBA-202ENST00000502839 VASPP50552 380 aaPredicted RBP19.23■□□□□ 0.67
LRBA-202ENST00000502839 CREBZFQ9NS37 354 aa19.21■□□□□ 0.67
LRBA-202ENST00000502839 PRKAR2AP13861 404 aaKnown RBP19.13■□□□□ 0.65
LRBA-202ENST00000502839 MIER1Q8N108 512 aa19.13■□□□□ 0.65
LRBA-202ENST00000502839 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.64
LRBA-202ENST00000502839 PLCD3Q8N3E9 789 aa19.07■□□□□ 0.64
LRBA-202ENST00000502839 CHADLQ6NUI6 762 aa19.06■□□□□ 0.64
LRBA-202ENST00000502839 PLEKHG5O94827 1062 aa19.04■□□□□ 0.64
LRBA-202ENST00000502839 IFNLR1Q8IU57 520 aaPredicted RBP18.99■□□□□ 0.63
LRBA-202ENST00000502839 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
LRBA-202ENST00000502839 POTEHQ6S545 545 aa18.98■□□□□ 0.63
LRBA-202ENST00000502839 ZBTB47Q9UFB7 747 aaPredicted RBP18.98■□□□□ 0.63
LRBA-202ENST00000502839 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
LRBA-202ENST00000502839 KLHL34Q8N239 644 aa18.8■□□□□ 0.6
LRBA-202ENST00000502839 NUBP1P53384 320 aa18.77■□□□□ 0.6
LRBA-202ENST00000502839 SPOCK2Q92563 424 aa18.75■□□□□ 0.59
LRBA-202ENST00000502839 C19orf67A6NJJ6 358 aa18.72■□□□□ 0.59
LRBA-202ENST00000502839 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
LRBA-202ENST00000502839 HAX1O00165 279 aa18.59■□□□□ 0.57
LRBA-202ENST00000502839 CD44P16070 742 aaKnown RBP18.58■□□□□ 0.56
LRBA-202ENST00000502839 FAM212AQ96EL1 285 aa18.53■□□□□ 0.56
LRBA-202ENST00000502839 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
LRBA-202ENST00000502839 GSE1Q14687 1217 aa18.51■□□□□ 0.55
LRBA-202ENST00000502839 EVX2Q03828 476 aa18.5■□□□□ 0.55
LRBA-202ENST00000502839 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
LRBA-202ENST00000502839 TSPYL2Q9H2G4 693 aaPredicted RBP18.45■□□□□ 0.54
LRBA-202ENST00000502839 ZRANB1Q9UGI0 708 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 262.5 ms