RNA–Protein interactions for RNA: ENST00000502526.1

SEC24D-203, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 351 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-203ENST00000502526 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
SEC24D-203ENST00000502526 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
SEC24D-203ENST00000502526 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
SEC24D-203ENST00000502526 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
SEC24D-203ENST00000502526 FOXD1Q16676 465 aa14.04□□□□□ -0.16
SEC24D-203ENST00000502526 MSH5O43196 834 aa13.18□□□□□ -0.3
SEC24D-203ENST00000502526 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
SEC24D-203ENST00000502526 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
SEC24D-203ENST00000502526 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
SEC24D-203ENST00000502526 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
SEC24D-203ENST00000502526 ADRA2BP18089 450 aa12.93□□□□□ -0.34
SEC24D-203ENST00000502526 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
SEC24D-203ENST00000502526 DMRT2Q9Y5R5 561 aa11.9□□□□□ -0.5
SEC24D-203ENST00000502526 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
SEC24D-203ENST00000502526 PPP4R3CPQ6ZMV5 832 aa11.49□□□□□ -0.57
SEC24D-203ENST00000502526 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
SEC24D-203ENST00000502526 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
SEC24D-203ENST00000502526 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
SEC24D-203ENST00000502526 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
SEC24D-203ENST00000502526 RNF216Q9NWF9 866 aaPredicted RBP11.26□□□□□ -0.61
SEC24D-203ENST00000502526 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
SEC24D-203ENST00000502526 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
SEC24D-203ENST00000502526 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
SEC24D-203ENST00000502526 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
SEC24D-203ENST00000502526 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
SEC24D-203ENST00000502526 NPM3O75607 178 aaKnown RBP10.86□□□□□ -0.67
SEC24D-203ENST00000502526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.82□□□□□ -0.68
SEC24D-203ENST00000502526 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
SEC24D-203ENST00000502526 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
SEC24D-203ENST00000502526 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
SEC24D-203ENST00000502526 KCNA4P22459 653 aa10.5□□□□□ -0.73
SEC24D-203ENST00000502526 DSG3P32926 999 aa10.47□□□□□ -0.73
SEC24D-203ENST00000502526 CAPN15O75808 1086 aa10.46□□□□□ -0.73
SEC24D-203ENST00000502526 SLC4A2P04920 1241 aa10.43□□□□□ -0.74
SEC24D-203ENST00000502526 POTEHQ6S545 545 aa10.27□□□□□ -0.77
SEC24D-203ENST00000502526 TRHP20396 242 aaPredicted RBP10.26□□□□□ -0.77
SEC24D-203ENST00000502526 APLP2Q06481 763 aa10.25□□□□□ -0.77
SEC24D-203ENST00000502526 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
SEC24D-203ENST00000502526 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
SEC24D-203ENST00000502526 ABCB7O75027 752 aa10.23□□□□□ -0.77
SEC24D-203ENST00000502526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.77
SEC24D-203ENST00000502526 HNRNPUL2Q1KMD3 747 aaKnown RBP10.21□□□□□ -0.77
SEC24D-203ENST00000502526 SAMD1Q6SPF0 538 aaPredicted RBP10.16□□□□□ -0.78
SEC24D-203ENST00000502526 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
SEC24D-203ENST00000502526 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
SEC24D-203ENST00000502526 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
SEC24D-203ENST00000502526 RBM42Q9BTD8 480 aaKnown RBP9.97□□□□□ -0.81
SEC24D-203ENST00000502526 POLA2Q14181 598 aa9.95□□□□□ -0.82
SEC24D-203ENST00000502526 SLC4A1APQ9BWU0 796 aaKnown RBP9.86□□□□□ -0.83
SEC24D-203ENST00000502526 FOXD4L1Q9NU39 408 aa9.85□□□□□ -0.83
SEC24D-203ENST00000502526 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.83
SEC24D-203ENST00000502526 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
SEC24D-203ENST00000502526 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
SEC24D-203ENST00000502526 ZBTB12Q9Y330 459 aaPredicted RBP9.73□□□□□ -0.85
SEC24D-203ENST00000502526 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
SEC24D-203ENST00000502526 ZBTB22O15209 634 aa9.69□□□□□ -0.86
SEC24D-203ENST00000502526 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
SEC24D-203ENST00000502526 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
SEC24D-203ENST00000502526 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
SEC24D-203ENST00000502526 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
SEC24D-203ENST00000502526 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
SEC24D-203ENST00000502526 ATXN8OSP0DMR3 200 aa9.55□□□□□ -0.88
SEC24D-203ENST00000502526 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
SEC24D-203ENST00000502526 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
SEC24D-203ENST00000502526 ARXQ96QS3 562 aa9.44□□□□□ -0.9
SEC24D-203ENST00000502526 SPDYE2BA6NHP3 402 aa9.43□□□□□ -0.9
SEC24D-203ENST00000502526 SPDYE6P0CI01 402 aa9.43□□□□□ -0.9
SEC24D-203ENST00000502526 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
SEC24D-203ENST00000502526 TAOK2Q9UL54 1235 aa9.43□□□□□ -0.9
SEC24D-203ENST00000502526 HAX1O00165 279 aa9.41□□□□□ -0.9
SEC24D-203ENST00000502526 FBLN2P98095 1184 aa9.41□□□□□ -0.9
SEC24D-203ENST00000502526 MKRN4PQ13434 485 aaPredicted RBP9.38□□□□□ -0.91
SEC24D-203ENST00000502526 BCANQ96GW7 911 aa9.38□□□□□ -0.91
SEC24D-203ENST00000502526 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
SEC24D-203ENST00000502526 EVX2Q03828 476 aa9.33□□□□□ -0.92
SEC24D-203ENST00000502526 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
SEC24D-203ENST00000502526 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
SEC24D-203ENST00000502526 SPDYE1Q8NFV5 336 aaPredicted RBP9.29□□□□□ -0.92
SEC24D-203ENST00000502526 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
SEC24D-203ENST00000502526 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
SEC24D-203ENST00000502526 PRKAR2AP13861 404 aaKnown RBP9.27□□□□□ -0.93
SEC24D-203ENST00000502526 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
SEC24D-203ENST00000502526 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
SEC24D-203ENST00000502526 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
SEC24D-203ENST00000502526 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
SEC24D-203ENST00000502526 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
SEC24D-203ENST00000502526 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
SEC24D-203ENST00000502526 PABPN1Q86U42 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
SEC24D-203ENST00000502526 FKBP8Q14318 412 aa9.11□□□□□ -0.95
SEC24D-203ENST00000502526 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
SEC24D-203ENST00000502526 GABBR2O75899 941 aa9.09□□□□□ -0.95
SEC24D-203ENST00000502526 RANGAP1P46060 587 aaPredicted RBP9.07□□□□□ -0.96
SEC24D-203ENST00000502526 GTF3C3Q9Y5Q9 886 aa9.07□□□□□ -0.96
SEC24D-203ENST00000502526 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
SEC24D-203ENST00000502526 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
SEC24D-203ENST00000502526 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
SEC24D-203ENST00000502526 ERICH6Q7L0X2 663 aa8.98□□□□□ -0.97
SEC24D-203ENST00000502526 LHX8Q68G74 356 aa8.95□□□□□ -0.98
SEC24D-203ENST00000502526 POTEIP0CG38 1075 aa8.93□□□□□ -0.98
SEC24D-203ENST00000502526 PODXL2Q9NZ53 605 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms