RNA–Protein interactions for RNA: ENST00000498680.1

HMSD-203, Transcript of histocompatibility minor serpin domain containing, humanhuman

TSL 5

Gene HMSD, Length 543 nt, Biotype processed transcript, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMSD-203ENST00000498680 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
HMSD-203ENST00000498680 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
HMSD-203ENST00000498680 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
HMSD-203ENST00000498680 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
HMSD-203ENST00000498680 FOXD1Q16676 465 aa15.02■□□□□ -0
HMSD-203ENST00000498680 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
HMSD-203ENST00000498680 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
HMSD-203ENST00000498680 ADRA2BP18089 450 aa14.38□□□□□ -0.11
HMSD-203ENST00000498680 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
HMSD-203ENST00000498680 MSH5O43196 834 aa13.82□□□□□ -0.2
HMSD-203ENST00000498680 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
HMSD-203ENST00000498680 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
HMSD-203ENST00000498680 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
HMSD-203ENST00000498680 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
HMSD-203ENST00000498680 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
HMSD-203ENST00000498680 KCNA4P22459 653 aa12.82□□□□□ -0.36
HMSD-203ENST00000498680 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
HMSD-203ENST00000498680 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
HMSD-203ENST00000498680 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
HMSD-203ENST00000498680 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
HMSD-203ENST00000498680 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
HMSD-203ENST00000498680 DNAJC5BQ9UF47 199 aa12.34□□□□□ -0.43
HMSD-203ENST00000498680 DCAF8L1A6NGE4 600 aa12.25□□□□□ -0.45
HMSD-203ENST00000498680 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
HMSD-203ENST00000498680 SLC4A2P04920 1241 aa12□□□□□ -0.49
HMSD-203ENST00000498680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
HMSD-203ENST00000498680 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
HMSD-203ENST00000498680 ZBTB22O15209 634 aa11.82□□□□□ -0.52
HMSD-203ENST00000498680 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
HMSD-203ENST00000498680 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
HMSD-203ENST00000498680 C1QBPQ07021 282 aaKnown RBP11.71□□□□□ -0.53
HMSD-203ENST00000498680 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
HMSD-203ENST00000498680 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
HMSD-203ENST00000498680 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
HMSD-203ENST00000498680 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
HMSD-203ENST00000498680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
HMSD-203ENST00000498680 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
HMSD-203ENST00000498680 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
HMSD-203ENST00000498680 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
HMSD-203ENST00000498680 APLP2Q06481 763 aa11.41□□□□□ -0.58
HMSD-203ENST00000498680 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
HMSD-203ENST00000498680 CAPN15O75808 1086 aa11.39□□□□□ -0.59
HMSD-203ENST00000498680 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
HMSD-203ENST00000498680 TRHP20396 242 aaPredicted RBP11.33□□□□□ -0.6
HMSD-203ENST00000498680 ZNF219Q9P2Y4 722 aaPredicted RBP11.31□□□□□ -0.6
HMSD-203ENST00000498680 DSG3P32926 999 aa11.28□□□□□ -0.6
HMSD-203ENST00000498680 ABCB7O75027 752 aa11.18□□□□□ -0.62
HMSD-203ENST00000498680 POLA2Q14181 598 aa11.17□□□□□ -0.62
HMSD-203ENST00000498680 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
HMSD-203ENST00000498680 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
HMSD-203ENST00000498680 FBLN2P98095 1184 aa10.84□□□□□ -0.67
HMSD-203ENST00000498680 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
HMSD-203ENST00000498680 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
HMSD-203ENST00000498680 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
HMSD-203ENST00000498680 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
HMSD-203ENST00000498680 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
HMSD-203ENST00000498680 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
HMSD-203ENST00000498680 SSUH2Q9Y2M2 353 aa10.59□□□□□ -0.71
HMSD-203ENST00000498680 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
HMSD-203ENST00000498680 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
HMSD-203ENST00000498680 FKBP8Q14318 412 aa10.51□□□□□ -0.73
HMSD-203ENST00000498680 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
HMSD-203ENST00000498680 PABPN1Q86U42 306 aaKnown RBP eCLIP10.46□□□□□ -0.73
HMSD-203ENST00000498680 PROM2Q8N271 834 aa10.45□□□□□ -0.74
HMSD-203ENST00000498680 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
HMSD-203ENST00000498680 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
HMSD-203ENST00000498680 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
HMSD-203ENST00000498680 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
HMSD-203ENST00000498680 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
HMSD-203ENST00000498680 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
HMSD-203ENST00000498680 FXR2P51116 673 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMSD-203ENST00000498680 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
HMSD-203ENST00000498680 FBXO3Q9UK99 471 aa10.13□□□□□ -0.79
HMSD-203ENST00000498680 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
HMSD-203ENST00000498680 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
HMSD-203ENST00000498680 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
HMSD-203ENST00000498680 POTEHQ6S545 545 aa10.07□□□□□ -0.8
HMSD-203ENST00000498680 MIER1Q8N108 512 aa10.03□□□□□ -0.8
HMSD-203ENST00000498680 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
HMSD-203ENST00000498680 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
HMSD-203ENST00000498680 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
HMSD-203ENST00000498680 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
HMSD-203ENST00000498680 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
HMSD-203ENST00000498680 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
HMSD-203ENST00000498680 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMSD-203ENST00000498680 C19orf67A6NJJ6 358 aa9.85□□□□□ -0.83
HMSD-203ENST00000498680 ZBTB47Q9UFB7 747 aaPredicted RBP9.85□□□□□ -0.83
HMSD-203ENST00000498680 HAX1O00165 279 aa9.83□□□□□ -0.84
HMSD-203ENST00000498680 NUBP1P53384 320 aa9.83□□□□□ -0.84
HMSD-203ENST00000498680 EVX2Q03828 476 aa9.83□□□□□ -0.84
HMSD-203ENST00000498680 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
HMSD-203ENST00000498680 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
HMSD-203ENST00000498680 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
HMSD-203ENST00000498680 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
HMSD-203ENST00000498680 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
HMSD-203ENST00000498680 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
HMSD-203ENST00000498680 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
HMSD-203ENST00000498680 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
HMSD-203ENST00000498680 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
HMSD-203ENST00000498680 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms