RNA–Protein interactions for RNA: ENST00000498442.1

CRBN-212, Transcript of cereblon, humanhuman

TSL 2

Gene CRBN, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRBN-212ENST00000498442 AEBP2Q6ZN18 517 aaPredicted RBP34.2■■■■□ 3.07
CRBN-212ENST00000498442 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
CRBN-212ENST00000498442 SENP3Q9H4L4 574 aaPredicted RBP29.16■■■□□ 2.26
CRBN-212ENST00000498442 PHF23Q9BUL5 403 aaPredicted RBP28.69■■■□□ 2.18
CRBN-212ENST00000498442 FOXD1Q16676 465 aa27.37■■□□□ 1.97
CRBN-212ENST00000498442 POTEDQ86YR6 584 aa26.75■■□□□ 1.87
CRBN-212ENST00000498442 MSH5O43196 834 aa25.82■■□□□ 1.72
CRBN-212ENST00000498442 PIAS4Q8N2W9 510 aaPredicted RBP25.31■■□□□ 1.64
CRBN-212ENST00000498442 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
CRBN-212ENST00000498442 ADRA2BP18089 450 aa24.81■■□□□ 1.56
CRBN-212ENST00000498442 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
CRBN-212ENST00000498442 MAPK8IP2Q13387 824 aaPredicted RBP23.06■■□□□ 1.28
CRBN-212ENST00000498442 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
CRBN-212ENST00000498442 CACNB1Q02641 598 aaPredicted RBP22.67■■□□□ 1.22
CRBN-212ENST00000498442 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
CRBN-212ENST00000498442 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
CRBN-212ENST00000498442 RNF39Q9H2S5 420 aa22.04■■□□□ 1.12
CRBN-212ENST00000498442 HOXD11P31277 338 aaPredicted RBP21.87■■□□□ 1.09
CRBN-212ENST00000498442 PPP4R3CPQ6ZMV5 832 aa21.64■■□□□ 1.05
CRBN-212ENST00000498442 C1QBPQ07021 282 aaKnown RBP21.59■■□□□ 1.05
CRBN-212ENST00000498442 RNF216Q9NWF9 866 aaPredicted RBP21.43■■□□□ 1.02
CRBN-212ENST00000498442 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
CRBN-212ENST00000498442 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
CRBN-212ENST00000498442 NCBP3Q53F19 620 aaKnown RBP20.91■□□□□ 0.94
CRBN-212ENST00000498442 KCNA4P22459 653 aa20.82■□□□□ 0.92
CRBN-212ENST00000498442 POTEHQ6S545 545 aa20.75■□□□□ 0.91
CRBN-212ENST00000498442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
CRBN-212ENST00000498442 NPM3O75607 178 aaKnown RBP20.64■□□□□ 0.89
CRBN-212ENST00000498442 DSG3P32926 999 aa20.35■□□□□ 0.85
CRBN-212ENST00000498442 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
CRBN-212ENST00000498442 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
CRBN-212ENST00000498442 CAPN15O75808 1086 aa20.19■□□□□ 0.82
CRBN-212ENST00000498442 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
CRBN-212ENST00000498442 ABCB7O75027 752 aa19.72■□□□□ 0.75
CRBN-212ENST00000498442 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
CRBN-212ENST00000498442 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
CRBN-212ENST00000498442 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
CRBN-212ENST00000498442 APLP2Q06481 763 aa19.46■□□□□ 0.71
CRBN-212ENST00000498442 RBM42Q9BTD8 480 aaKnown RBP19.32■□□□□ 0.68
CRBN-212ENST00000498442 CHRDL2Q6WN34 429 aa19.31■□□□□ 0.68
CRBN-212ENST00000498442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
CRBN-212ENST00000498442 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
CRBN-212ENST00000498442 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
CRBN-212ENST00000498442 ZBTB22O15209 634 aa19.17■□□□□ 0.66
CRBN-212ENST00000498442 SAMD1Q6SPF0 538 aaPredicted RBP19.17■□□□□ 0.66
CRBN-212ENST00000498442 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
CRBN-212ENST00000498442 SP7Q8TDD2 431 aaPredicted RBP19.05■□□□□ 0.64
CRBN-212ENST00000498442 POLA2Q14181 598 aa18.98■□□□□ 0.63
CRBN-212ENST00000498442 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
CRBN-212ENST00000498442 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
CRBN-212ENST00000498442 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
CRBN-212ENST00000498442 PIP4P2Q8N4L2 257 aa18.71■□□□□ 0.59
CRBN-212ENST00000498442 REM2Q8IYK8 340 aaPredicted RBP18.61■□□□□ 0.57
CRBN-212ENST00000498442 ATF5Q9Y2D1 282 aaPredicted RBP18.61■□□□□ 0.57
CRBN-212ENST00000498442 ATXN8OSP0DMR3 200 aa18.53■□□□□ 0.56
CRBN-212ENST00000498442 HAX1O00165 279 aa18.51■□□□□ 0.55
CRBN-212ENST00000498442 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
CRBN-212ENST00000498442 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.54
CRBN-212ENST00000498442 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
CRBN-212ENST00000498442 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
CRBN-212ENST00000498442 EVX2Q03828 476 aa18.38■□□□□ 0.53
CRBN-212ENST00000498442 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
CRBN-212ENST00000498442 C19orf67A6NJJ6 358 aa17.9■□□□□ 0.46
CRBN-212ENST00000498442 SPDYE2BA6NHP3 402 aa17.85■□□□□ 0.45
CRBN-212ENST00000498442 SPDYE6P0CI01 402 aa17.85■□□□□ 0.45
CRBN-212ENST00000498442 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
CRBN-212ENST00000498442 LHX8Q68G74 356 aa17.84■□□□□ 0.45
CRBN-212ENST00000498442 GABBR2O75899 941 aa17.83■□□□□ 0.44
CRBN-212ENST00000498442 FBLN2P98095 1184 aa17.8■□□□□ 0.44
CRBN-212ENST00000498442 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
CRBN-212ENST00000498442 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
CRBN-212ENST00000498442 SPDYE1Q8NFV5 336 aaPredicted RBP17.73■□□□□ 0.43
CRBN-212ENST00000498442 SSUH2Q9Y2M2 353 aa17.59■□□□□ 0.41
CRBN-212ENST00000498442 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
CRBN-212ENST00000498442 POTEIP0CG38 1075 aa17.53■□□□□ 0.4
CRBN-212ENST00000498442 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
CRBN-212ENST00000498442 PLSCR2Q9NRY7 297 aa17.37■□□□□ 0.37
CRBN-212ENST00000498442 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
CRBN-212ENST00000498442 CD44P16070 742 aaKnown RBP17.29■□□□□ 0.36
CRBN-212ENST00000498442 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
CRBN-212ENST00000498442 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
CRBN-212ENST00000498442 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
CRBN-212ENST00000498442 CLCN6P51797 869 aa17.12■□□□□ 0.33
CRBN-212ENST00000498442 DCBLD2Q96PD2 775 aa17.08■□□□□ 0.32
CRBN-212ENST00000498442 FKBP8Q14318 412 aa17.03■□□□□ 0.32
CRBN-212ENST00000498442 ZNF579Q8NAF0 562 aaKnown RBP17.02■□□□□ 0.32
CRBN-212ENST00000498442 OTUD5Q96G74 571 aa17■□□□□ 0.31
CRBN-212ENST00000498442 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
CRBN-212ENST00000498442 PROM2Q8N271 834 aa16.91■□□□□ 0.3
CRBN-212ENST00000498442 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
CRBN-212ENST00000498442 GALR2O43603 387 aaPredicted RBP16.9■□□□□ 0.3
CRBN-212ENST00000498442 POTEMA6NI47 508 aa16.85■□□□□ 0.29
CRBN-212ENST00000498442 CREBZFQ9NS37 354 aa16.8■□□□□ 0.28
CRBN-212ENST00000498442 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
CRBN-212ENST00000498442 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
CRBN-212ENST00000498442 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
CRBN-212ENST00000498442 PHF12Q96QT6 1004 aa16.67■□□□□ 0.26
CRBN-212ENST00000498442 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
CRBN-212ENST00000498442 LCE2DQ5TA82 110 aaPredicted RBP16.53■□□□□ 0.24
CRBN-212ENST00000498442 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms