RNA–Protein interactions for RNA: ENST00000498142.1

CCDC141-207, Transcript of coiled-coil domain containing 141, humanhuman

TSL 5

Gene CCDC141, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-207ENST00000498142 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
CCDC141-207ENST00000498142 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
CCDC141-207ENST00000498142 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
CCDC141-207ENST00000498142 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
CCDC141-207ENST00000498142 FOXD1Q16676 465 aa20.35■□□□□ 0.85
CCDC141-207ENST00000498142 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
CCDC141-207ENST00000498142 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
CCDC141-207ENST00000498142 ADRA2BP18089 450 aa19.39■□□□□ 0.69
CCDC141-207ENST00000498142 PIAS4Q8N2W9 510 aaPredicted RBP19.12■□□□□ 0.65
CCDC141-207ENST00000498142 MSH5O43196 834 aa18.84■□□□□ 0.61
CCDC141-207ENST00000498142 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
CCDC141-207ENST00000498142 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
CCDC141-207ENST00000498142 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
CCDC141-207ENST00000498142 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
CCDC141-207ENST00000498142 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
CCDC141-207ENST00000498142 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
CCDC141-207ENST00000498142 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
CCDC141-207ENST00000498142 KCNA4P22459 653 aa17.15■□□□□ 0.34
CCDC141-207ENST00000498142 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
CCDC141-207ENST00000498142 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
CCDC141-207ENST00000498142 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
CCDC141-207ENST00000498142 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
CCDC141-207ENST00000498142 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
CCDC141-207ENST00000498142 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
CCDC141-207ENST00000498142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCDC141-207ENST00000498142 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
CCDC141-207ENST00000498142 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
CCDC141-207ENST00000498142 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
CCDC141-207ENST00000498142 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
CCDC141-207ENST00000498142 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
CCDC141-207ENST00000498142 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
CCDC141-207ENST00000498142 ZBTB22O15209 634 aa15.79■□□□□ 0.12
CCDC141-207ENST00000498142 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
CCDC141-207ENST00000498142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
CCDC141-207ENST00000498142 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
CCDC141-207ENST00000498142 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
CCDC141-207ENST00000498142 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
CCDC141-207ENST00000498142 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
CCDC141-207ENST00000498142 APLP2Q06481 763 aa15.54■□□□□ 0.08
CCDC141-207ENST00000498142 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
CCDC141-207ENST00000498142 CAPN15O75808 1086 aa15.47■□□□□ 0.07
CCDC141-207ENST00000498142 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
CCDC141-207ENST00000498142 TRHP20396 242 aaPredicted RBP15.34■□□□□ 0.05
CCDC141-207ENST00000498142 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
CCDC141-207ENST00000498142 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
CCDC141-207ENST00000498142 DSG3P32926 999 aa15.28■□□□□ 0.04
CCDC141-207ENST00000498142 ABCB7O75027 752 aa15.14■□□□□ 0.01
CCDC141-207ENST00000498142 POLA2Q14181 598 aa15.07■□□□□ 0
CCDC141-207ENST00000498142 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
CCDC141-207ENST00000498142 FBLN2P98095 1184 aa14.67□□□□□ -0.06
CCDC141-207ENST00000498142 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
CCDC141-207ENST00000498142 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
CCDC141-207ENST00000498142 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
CCDC141-207ENST00000498142 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
CCDC141-207ENST00000498142 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
CCDC141-207ENST00000498142 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
CCDC141-207ENST00000498142 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
CCDC141-207ENST00000498142 ZNF692Q9BU19 519 aaPredicted RBP14.31□□□□□ -0.12
CCDC141-207ENST00000498142 SSUH2Q9Y2M2 353 aa14.29□□□□□ -0.12
CCDC141-207ENST00000498142 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
CCDC141-207ENST00000498142 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
CCDC141-207ENST00000498142 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC141-207ENST00000498142 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
CCDC141-207ENST00000498142 FKBP8Q14318 412 aa14.04□□□□□ -0.16
CCDC141-207ENST00000498142 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
CCDC141-207ENST00000498142 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
CCDC141-207ENST00000498142 PROM2Q8N271 834 aa14□□□□□ -0.17
CCDC141-207ENST00000498142 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
CCDC141-207ENST00000498142 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CCDC141-207ENST00000498142 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC141-207ENST00000498142 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
CCDC141-207ENST00000498142 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
CCDC141-207ENST00000498142 POTEHQ6S545 545 aa13.79□□□□□ -0.2
CCDC141-207ENST00000498142 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
CCDC141-207ENST00000498142 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
CCDC141-207ENST00000498142 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
CCDC141-207ENST00000498142 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
CCDC141-207ENST00000498142 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
CCDC141-207ENST00000498142 MIER1Q8N108 512 aa13.48□□□□□ -0.25
CCDC141-207ENST00000498142 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
CCDC141-207ENST00000498142 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
CCDC141-207ENST00000498142 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
CCDC141-207ENST00000498142 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
CCDC141-207ENST00000498142 HAX1O00165 279 aa13.39□□□□□ -0.27
CCDC141-207ENST00000498142 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
CCDC141-207ENST00000498142 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC141-207ENST00000498142 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
CCDC141-207ENST00000498142 EVX2Q03828 476 aa13.29□□□□□ -0.28
CCDC141-207ENST00000498142 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
CCDC141-207ENST00000498142 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
CCDC141-207ENST00000498142 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
CCDC141-207ENST00000498142 NUBP1P53384 320 aa13.19□□□□□ -0.3
CCDC141-207ENST00000498142 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
CCDC141-207ENST00000498142 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
CCDC141-207ENST00000498142 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
CCDC141-207ENST00000498142 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
CCDC141-207ENST00000498142 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
CCDC141-207ENST00000498142 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
CCDC141-207ENST00000498142 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
CCDC141-207ENST00000498142 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms