RNA–Protein interactions for RNA: ENST00000497811.5

LINC00635-208, long intergenic non-protein coding RNA 635, humanhuman

TSL 1 (best)

Gene LINC00635, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-208ENST00000497811 AEBP2Q6ZN18 517 aaPredicted RBP32.5■■■□□ 2.79
LINC00635-208ENST00000497811 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
LINC00635-208ENST00000497811 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
LINC00635-208ENST00000497811 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
LINC00635-208ENST00000497811 FOXD1Q16676 465 aa25.61■■□□□ 1.69
LINC00635-208ENST00000497811 PLPPR3Q6T4P5 718 aa25.55■■□□□ 1.68
LINC00635-208ENST00000497811 PPP6R1Q9UPN7 881 aa24.56■■□□□ 1.52
LINC00635-208ENST00000497811 ADRA2BP18089 450 aa24.51■■□□□ 1.51
LINC00635-208ENST00000497811 PIAS4Q8N2W9 510 aaPredicted RBP24.1■■□□□ 1.45
LINC00635-208ENST00000497811 MSH5O43196 834 aa23.65■■□□□ 1.38
LINC00635-208ENST00000497811 PPP4R3CPQ6ZMV5 832 aa22.51■■□□□ 1.19
LINC00635-208ENST00000497811 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
LINC00635-208ENST00000497811 MAPK8IP2Q13387 824 aaPredicted RBP22.29■■□□□ 1.16
LINC00635-208ENST00000497811 DMRT2Q9Y5R5 561 aa21.99■■□□□ 1.11
LINC00635-208ENST00000497811 CNKSR2Q8WXI2 1034 aa21.9■■□□□ 1.1
LINC00635-208ENST00000497811 KCNA4P22459 653 aa21.84■■□□□ 1.09
LINC00635-208ENST00000497811 NCBP3Q53F19 620 aaKnown RBP21.84■■□□□ 1.09
LINC00635-208ENST00000497811 POTEDQ86YR6 584 aa21.82■■□□□ 1.08
LINC00635-208ENST00000497811 NPM3O75607 178 aaKnown RBP21.57■■□□□ 1.04
LINC00635-208ENST00000497811 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
LINC00635-208ENST00000497811 HOXD11P31277 338 aaPredicted RBP21.48■■□□□ 1.03
LINC00635-208ENST00000497811 DCAF8L1A6NGE4 600 aa21.01■□□□□ 0.95
LINC00635-208ENST00000497811 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
LINC00635-208ENST00000497811 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
LINC00635-208ENST00000497811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC00635-208ENST00000497811 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
LINC00635-208ENST00000497811 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
LINC00635-208ENST00000497811 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
LINC00635-208ENST00000497811 ZBTB22O15209 634 aa20.12■□□□□ 0.81
LINC00635-208ENST00000497811 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
LINC00635-208ENST00000497811 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
LINC00635-208ENST00000497811 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
LINC00635-208ENST00000497811 MYCNP04198 464 aaPredicted RBP19.91■□□□□ 0.78
LINC00635-208ENST00000497811 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
LINC00635-208ENST00000497811 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.77
LINC00635-208ENST00000497811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
LINC00635-208ENST00000497811 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
LINC00635-208ENST00000497811 SAMD1Q6SPF0 538 aaPredicted RBP19.71■□□□□ 0.75
LINC00635-208ENST00000497811 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
LINC00635-208ENST00000497811 APLP2Q06481 763 aa19.58■□□□□ 0.72
LINC00635-208ENST00000497811 CAPN15O75808 1086 aa19.5■□□□□ 0.71
LINC00635-208ENST00000497811 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
LINC00635-208ENST00000497811 ATXN8OSP0DMR3 200 aa19.43■□□□□ 0.7
LINC00635-208ENST00000497811 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
LINC00635-208ENST00000497811 ZNF219Q9P2Y4 722 aaPredicted RBP19.36■□□□□ 0.69
LINC00635-208ENST00000497811 DSG3P32926 999 aa19.24■□□□□ 0.67
LINC00635-208ENST00000497811 ABCB7O75027 752 aa19.15■□□□□ 0.66
LINC00635-208ENST00000497811 POLA2Q14181 598 aa19.05■□□□□ 0.64
LINC00635-208ENST00000497811 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
LINC00635-208ENST00000497811 MKRN4PQ13434 485 aaPredicted RBP18.58■□□□□ 0.56
LINC00635-208ENST00000497811 FBLN2P98095 1184 aa18.57■□□□□ 0.56
LINC00635-208ENST00000497811 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
LINC00635-208ENST00000497811 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
LINC00635-208ENST00000497811 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
LINC00635-208ENST00000497811 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
LINC00635-208ENST00000497811 SPDYE2Q495Y8 402 aa18.19■□□□□ 0.5
LINC00635-208ENST00000497811 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
LINC00635-208ENST00000497811 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
LINC00635-208ENST00000497811 AKT1S1Q96B36 256 aa18.06■□□□□ 0.48
LINC00635-208ENST00000497811 SSUH2Q9Y2M2 353 aa18.06■□□□□ 0.48
LINC00635-208ENST00000497811 FKBP8Q14318 412 aa17.94■□□□□ 0.46
LINC00635-208ENST00000497811 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
LINC00635-208ENST00000497811 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC00635-208ENST00000497811 PROM2Q8N271 834 aa17.77■□□□□ 0.44
LINC00635-208ENST00000497811 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
LINC00635-208ENST00000497811 SPDYE1Q8NFV5 336 aaPredicted RBP17.69■□□□□ 0.42
LINC00635-208ENST00000497811 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
LINC00635-208ENST00000497811 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
LINC00635-208ENST00000497811 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
LINC00635-208ENST00000497811 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
LINC00635-208ENST00000497811 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00635-208ENST00000497811 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
LINC00635-208ENST00000497811 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
LINC00635-208ENST00000497811 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
LINC00635-208ENST00000497811 POTEHQ6S545 545 aa17.24■□□□□ 0.35
LINC00635-208ENST00000497811 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
LINC00635-208ENST00000497811 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
LINC00635-208ENST00000497811 MIER1Q8N108 512 aa17.13■□□□□ 0.33
LINC00635-208ENST00000497811 VASPP50552 380 aaPredicted RBP17.11■□□□□ 0.33
LINC00635-208ENST00000497811 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.32
LINC00635-208ENST00000497811 FARP1Q9Y4F1 1045 aaPredicted RBP17.05■□□□□ 0.32
LINC00635-208ENST00000497811 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
LINC00635-208ENST00000497811 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
LINC00635-208ENST00000497811 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC00635-208ENST00000497811 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
LINC00635-208ENST00000497811 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
LINC00635-208ENST00000497811 HAX1O00165 279 aa16.84■□□□□ 0.29
LINC00635-208ENST00000497811 C19orf67A6NJJ6 358 aa16.82■□□□□ 0.28
LINC00635-208ENST00000497811 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
LINC00635-208ENST00000497811 CD44P16070 742 aaKnown RBP16.74■□□□□ 0.27
LINC00635-208ENST00000497811 NUBP1P53384 320 aa16.73■□□□□ 0.27
LINC00635-208ENST00000497811 EVX2Q03828 476 aa16.73■□□□□ 0.27
LINC00635-208ENST00000497811 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
LINC00635-208ENST00000497811 SPOCK2Q92563 424 aa16.68■□□□□ 0.26
LINC00635-208ENST00000497811 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
LINC00635-208ENST00000497811 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
LINC00635-208ENST00000497811 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
LINC00635-208ENST00000497811 FAM212AQ96EL1 285 aa16.57■□□□□ 0.24
LINC00635-208ENST00000497811 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
LINC00635-208ENST00000497811 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms