RNA–Protein interactions for RNA: ENST00000493737.5

RNFT1-207, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 2

Gene RNFT1, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-207ENST00000493737 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
RNFT1-207ENST00000493737 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
RNFT1-207ENST00000493737 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
RNFT1-207ENST00000493737 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
RNFT1-207ENST00000493737 FOXD1Q16676 465 aa17.31■□□□□ 0.36
RNFT1-207ENST00000493737 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
RNFT1-207ENST00000493737 MSH5O43196 834 aa16.51■□□□□ 0.23
RNFT1-207ENST00000493737 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
RNFT1-207ENST00000493737 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
RNFT1-207ENST00000493737 ADRA2BP18089 450 aa15.62■□□□□ 0.09
RNFT1-207ENST00000493737 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
RNFT1-207ENST00000493737 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
RNFT1-207ENST00000493737 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
RNFT1-207ENST00000493737 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
RNFT1-207ENST00000493737 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
RNFT1-207ENST00000493737 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
RNFT1-207ENST00000493737 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
RNFT1-207ENST00000493737 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
RNFT1-207ENST00000493737 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
RNFT1-207ENST00000493737 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
RNFT1-207ENST00000493737 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
RNFT1-207ENST00000493737 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
RNFT1-207ENST00000493737 POTEHQ6S545 545 aa13.38□□□□□ -0.27
RNFT1-207ENST00000493737 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
RNFT1-207ENST00000493737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
RNFT1-207ENST00000493737 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
RNFT1-207ENST00000493737 CAPN15O75808 1086 aa12.9□□□□□ -0.34
RNFT1-207ENST00000493737 DSG3P32926 999 aa12.88□□□□□ -0.35
RNFT1-207ENST00000493737 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
RNFT1-207ENST00000493737 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
RNFT1-207ENST00000493737 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
RNFT1-207ENST00000493737 KCNA4P22459 653 aa12.69□□□□□ -0.38
RNFT1-207ENST00000493737 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
RNFT1-207ENST00000493737 ABCB7O75027 752 aa12.53□□□□□ -0.4
RNFT1-207ENST00000493737 APLP2Q06481 763 aa12.45□□□□□ -0.42
RNFT1-207ENST00000493737 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
RNFT1-207ENST00000493737 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
RNFT1-207ENST00000493737 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
RNFT1-207ENST00000493737 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
RNFT1-207ENST00000493737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
RNFT1-207ENST00000493737 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
RNFT1-207ENST00000493737 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
RNFT1-207ENST00000493737 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
RNFT1-207ENST00000493737 POLA2Q14181 598 aa12□□□□□ -0.49
RNFT1-207ENST00000493737 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
RNFT1-207ENST00000493737 HAX1O00165 279 aa11.93□□□□□ -0.5
RNFT1-207ENST00000493737 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
RNFT1-207ENST00000493737 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
RNFT1-207ENST00000493737 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
RNFT1-207ENST00000493737 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
RNFT1-207ENST00000493737 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
RNFT1-207ENST00000493737 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
RNFT1-207ENST00000493737 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
RNFT1-207ENST00000493737 ZBTB22O15209 634 aa11.68□□□□□ -0.54
RNFT1-207ENST00000493737 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNFT1-207ENST00000493737 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
RNFT1-207ENST00000493737 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
RNFT1-207ENST00000493737 EVX2Q03828 476 aa11.61□□□□□ -0.55
RNFT1-207ENST00000493737 LHX8Q68G74 356 aa11.48□□□□□ -0.57
RNFT1-207ENST00000493737 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
RNFT1-207ENST00000493737 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
RNFT1-207ENST00000493737 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
RNFT1-207ENST00000493737 GABBR2O75899 941 aa11.36□□□□□ -0.59
RNFT1-207ENST00000493737 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
RNFT1-207ENST00000493737 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
RNFT1-207ENST00000493737 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
RNFT1-207ENST00000493737 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
RNFT1-207ENST00000493737 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
RNFT1-207ENST00000493737 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
RNFT1-207ENST00000493737 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
RNFT1-207ENST00000493737 FBLN2P98095 1184 aa11.18□□□□□ -0.62
RNFT1-207ENST00000493737 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
RNFT1-207ENST00000493737 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
RNFT1-207ENST00000493737 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
RNFT1-207ENST00000493737 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
RNFT1-207ENST00000493737 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
RNFT1-207ENST00000493737 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
RNFT1-207ENST00000493737 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
RNFT1-207ENST00000493737 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
RNFT1-207ENST00000493737 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
RNFT1-207ENST00000493737 CLCN6P51797 869 aa10.95□□□□□ -0.66
RNFT1-207ENST00000493737 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
RNFT1-207ENST00000493737 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
RNFT1-207ENST00000493737 POTEMA6NI47 508 aa10.87□□□□□ -0.67
RNFT1-207ENST00000493737 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
RNFT1-207ENST00000493737 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
RNFT1-207ENST00000493737 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
RNFT1-207ENST00000493737 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
RNFT1-207ENST00000493737 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
RNFT1-207ENST00000493737 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
RNFT1-207ENST00000493737 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
RNFT1-207ENST00000493737 PAK3O75914 559 aaPredicted RBP10.6□□□□□ -0.71
RNFT1-207ENST00000493737 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
RNFT1-207ENST00000493737 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
RNFT1-207ENST00000493737 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
RNFT1-207ENST00000493737 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
RNFT1-207ENST00000493737 METRNQ9UJH8 293 aa10.51□□□□□ -0.73
RNFT1-207ENST00000493737 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
RNFT1-207ENST00000493737 MAMSTRQ6ZN01 415 aa10.49□□□□□ -0.73
RNFT1-207ENST00000493737 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms