RNA–Protein interactions for RNA: ENST00000493194.2

LRMDA-206, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2

Gene LRMDA, Length 246 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-206ENST00000493194 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
LRMDA-206ENST00000493194 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
LRMDA-206ENST00000493194 PHF23Q9BUL5 403 aaPredicted RBP15.03■□□□□ -0
LRMDA-206ENST00000493194 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
LRMDA-206ENST00000493194 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
LRMDA-206ENST00000493194 ADRA2BP18089 450 aa13.22□□□□□ -0.29
LRMDA-206ENST00000493194 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
LRMDA-206ENST00000493194 KCNA4P22459 653 aa13.15□□□□□ -0.3
LRMDA-206ENST00000493194 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
LRMDA-206ENST00000493194 FOXD1Q16676 465 aa12.91□□□□□ -0.34
LRMDA-206ENST00000493194 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
LRMDA-206ENST00000493194 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
LRMDA-206ENST00000493194 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
LRMDA-206ENST00000493194 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
LRMDA-206ENST00000493194 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
LRMDA-206ENST00000493194 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
LRMDA-206ENST00000493194 ZBTB22O15209 634 aa12.1□□□□□ -0.47
LRMDA-206ENST00000493194 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
LRMDA-206ENST00000493194 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
LRMDA-206ENST00000493194 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
LRMDA-206ENST00000493194 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
LRMDA-206ENST00000493194 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
LRMDA-206ENST00000493194 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
LRMDA-206ENST00000493194 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
LRMDA-206ENST00000493194 MSH5O43196 834 aa11.63□□□□□ -0.55
LRMDA-206ENST00000493194 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
LRMDA-206ENST00000493194 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
LRMDA-206ENST00000493194 FKBP8Q14318 412 aa11.43□□□□□ -0.58
LRMDA-206ENST00000493194 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
LRMDA-206ENST00000493194 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
LRMDA-206ENST00000493194 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
LRMDA-206ENST00000493194 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
LRMDA-206ENST00000493194 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
LRMDA-206ENST00000493194 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
LRMDA-206ENST00000493194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
LRMDA-206ENST00000493194 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
LRMDA-206ENST00000493194 SAMD1Q6SPF0 538 aaPredicted RBP10.9□□□□□ -0.66
LRMDA-206ENST00000493194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.67
LRMDA-206ENST00000493194 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
LRMDA-206ENST00000493194 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
LRMDA-206ENST00000493194 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
LRMDA-206ENST00000493194 U3KPZ7 1027 aaPredicted RBP10.77□□□□□ -0.69
LRMDA-206ENST00000493194 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
LRMDA-206ENST00000493194 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
LRMDA-206ENST00000493194 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
LRMDA-206ENST00000493194 DCAF8L2P0C7V8 631 aa10.66□□□□□ -0.7
LRMDA-206ENST00000493194 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
LRMDA-206ENST00000493194 APLP2Q06481 763 aa10.63□□□□□ -0.71
LRMDA-206ENST00000493194 BCANQ96GW7 911 aa10.61□□□□□ -0.71
LRMDA-206ENST00000493194 PROM2Q8N271 834 aa10.58□□□□□ -0.72
LRMDA-206ENST00000493194 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
LRMDA-206ENST00000493194 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
LRMDA-206ENST00000493194 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
LRMDA-206ENST00000493194 FBLN2P98095 1184 aa10.5□□□□□ -0.73
LRMDA-206ENST00000493194 PRKCSHP14314 528 aaPredicted RBP10.48□□□□□ -0.73
LRMDA-206ENST00000493194 PKD2Q13563 968 aa10.47□□□□□ -0.73
LRMDA-206ENST00000493194 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
LRMDA-206ENST00000493194 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
LRMDA-206ENST00000493194 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
LRMDA-206ENST00000493194 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
LRMDA-206ENST00000493194 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
LRMDA-206ENST00000493194 ECM2O94769 699 aaPredicted RBP10.31□□□□□ -0.76
LRMDA-206ENST00000493194 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
LRMDA-206ENST00000493194 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
LRMDA-206ENST00000493194 SPOCK2Q92563 424 aa10.31□□□□□ -0.76
LRMDA-206ENST00000493194 POLA2Q14181 598 aa10.3□□□□□ -0.76
LRMDA-206ENST00000493194 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
LRMDA-206ENST00000493194 CFAP44Q96MT7 982 aa10.29□□□□□ -0.76
LRMDA-206ENST00000493194 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
LRMDA-206ENST00000493194 SPINK5Q9NQ38 1064 aaPredicted RBP10.24□□□□□ -0.77
LRMDA-206ENST00000493194 ZBTB12Q9Y330 459 aaPredicted RBP10.21□□□□□ -0.77
LRMDA-206ENST00000493194 CAPN15O75808 1086 aa10.19□□□□□ -0.78
LRMDA-206ENST00000493194 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
LRMDA-206ENST00000493194 RGL2O15211 777 aa10.17□□□□□ -0.78
LRMDA-206ENST00000493194 STAG3Q9UJ98 1225 aa10.17□□□□□ -0.78
LRMDA-206ENST00000493194 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
LRMDA-206ENST00000493194 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
LRMDA-206ENST00000493194 CHGAP10645 457 aaKnown RBP10.07□□□□□ -0.8
LRMDA-206ENST00000493194 ZNF692Q9BU19 519 aaPredicted RBP10.07□□□□□ -0.8
LRMDA-206ENST00000493194 ABCB7O75027 752 aa10.06□□□□□ -0.8
LRMDA-206ENST00000493194 NBR1Q14596 966 aa10.06□□□□□ -0.8
LRMDA-206ENST00000493194 MIER1Q8N108 512 aa10.05□□□□□ -0.8
LRMDA-206ENST00000493194 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
LRMDA-206ENST00000493194 RNF39Q9H2S5 420 aa10.02□□□□□ -0.81
LRMDA-206ENST00000493194 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
LRMDA-206ENST00000493194 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
LRMDA-206ENST00000493194 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
LRMDA-206ENST00000493194 PLEKHG5O94827 1062 aa9.98□□□□□ -0.81
LRMDA-206ENST00000493194 DNAJC5Q9H3Z4 198 aa9.98□□□□□ -0.81
LRMDA-206ENST00000493194 ZBTB47Q9UFB7 747 aaPredicted RBP9.98□□□□□ -0.81
LRMDA-206ENST00000493194 SSUH2Q9Y2M2 353 aa9.98□□□□□ -0.81
LRMDA-206ENST00000493194 PABPN1Q86U42 306 aaKnown RBP eCLIP9.96□□□□□ -0.82
LRMDA-206ENST00000493194 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
LRMDA-206ENST00000493194 C1QBPQ07021 282 aaKnown RBP9.95□□□□□ -0.82
LRMDA-206ENST00000493194 HS6ST3Q8IZP7 471 aa9.95□□□□□ -0.82
LRMDA-206ENST00000493194 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
LRMDA-206ENST00000493194 TIMELESSQ9UNS1 1208 aa9.86□□□□□ -0.83
LRMDA-206ENST00000493194 TULP1O00294 542 aaPredicted RBP9.83□□□□□ -0.84
LRMDA-206ENST00000493194 GSE1Q14687 1217 aa9.83□□□□□ -0.84
LRMDA-206ENST00000493194 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms