RNA–Protein interactions for RNA: ENST00000492604.1

USP34-219, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 527 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-219ENST00000492604 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
USP34-219ENST00000492604 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
USP34-219ENST00000492604 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
USP34-219ENST00000492604 PHF23Q9BUL5 403 aaPredicted RBP16.01■□□□□ 0.15
USP34-219ENST00000492604 FOXD1Q16676 465 aa15.22■□□□□ 0.03
USP34-219ENST00000492604 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
USP34-219ENST00000492604 MSH5O43196 834 aa14.32□□□□□ -0.12
USP34-219ENST00000492604 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
USP34-219ENST00000492604 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
USP34-219ENST00000492604 ADRA2BP18089 450 aa13.9□□□□□ -0.18
USP34-219ENST00000492604 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
USP34-219ENST00000492604 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
USP34-219ENST00000492604 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
USP34-219ENST00000492604 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
USP34-219ENST00000492604 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
USP34-219ENST00000492604 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
USP34-219ENST00000492604 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
USP34-219ENST00000492604 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
USP34-219ENST00000492604 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
USP34-219ENST00000492604 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
USP34-219ENST00000492604 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
USP34-219ENST00000492604 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
USP34-219ENST00000492604 KCNA4P22459 653 aa11.81□□□□□ -0.52
USP34-219ENST00000492604 DNAJC5BQ9UF47 199 aa11.74□□□□□ -0.53
USP34-219ENST00000492604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.541e-7■■■■□ 24.4
USP34-219ENST00000492604 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
USP34-219ENST00000492604 POTEHQ6S545 545 aa11.47□□□□□ -0.57
USP34-219ENST00000492604 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
USP34-219ENST00000492604 NPM3O75607 178 aaKnown RBP11.39□□□□□ -0.59
USP34-219ENST00000492604 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
USP34-219ENST00000492604 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
USP34-219ENST00000492604 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
USP34-219ENST00000492604 CAPN15O75808 1086 aa11.32□□□□□ -0.6
USP34-219ENST00000492604 DSG3P32926 999 aa11.32□□□□□ -0.6
USP34-219ENST00000492604 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
USP34-219ENST00000492604 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
USP34-219ENST00000492604 ABCB7O75027 752 aa11.05□□□□□ -0.64
USP34-219ENST00000492604 SLC4A2P04920 1241 aa11□□□□□ -0.65
USP34-219ENST00000492604 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
USP34-219ENST00000492604 APLP2Q06481 763 aa10.88□□□□□ -0.67
USP34-219ENST00000492604 ZBTB22O15209 634 aa10.85□□□□□ -0.67
USP34-219ENST00000492604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
USP34-219ENST00000492604 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
USP34-219ENST00000492604 FOXD4L1Q9NU39 408 aa10.79□□□□□ -0.68
USP34-219ENST00000492604 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
USP34-219ENST00000492604 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
USP34-219ENST00000492604 CHRDL2Q6WN34 429 aa10.74□□□□□ -0.69
USP34-219ENST00000492604 POLA2Q14181 598 aa10.66□□□□□ -0.7
USP34-219ENST00000492604 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
USP34-219ENST00000492604 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
USP34-219ENST00000492604 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
USP34-219ENST00000492604 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
USP34-219ENST00000492604 REM2Q8IYK8 340 aaPredicted RBP10.39□□□□□ -0.75
USP34-219ENST00000492604 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
USP34-219ENST00000492604 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
USP34-219ENST00000492604 HAX1O00165 279 aa10.37□□□□□ -0.75
USP34-219ENST00000492604 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
USP34-219ENST00000492604 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
USP34-219ENST00000492604 PITPNM1O00562 1244 aa10.28□□□□□ -0.76
USP34-219ENST00000492604 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.775e-8■■■■□ 20.6
USP34-219ENST00000492604 EVX2Q03828 476 aa10.23□□□□□ -0.77
USP34-219ENST00000492604 FKBP8Q14318 412 aa10.07□□□□□ -0.8
USP34-219ENST00000492604 PRKAR2AP13861 404 aaKnown RBP10.02□□□□□ -0.81
USP34-219ENST00000492604 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
USP34-219ENST00000492604 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
USP34-219ENST00000492604 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
USP34-219ENST00000492604 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
USP34-219ENST00000492604 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
USP34-219ENST00000492604 GABBR2O75899 941 aa9.94□□□□□ -0.82
USP34-219ENST00000492604 FBLN2P98095 1184 aa9.93□□□□□ -0.82
USP34-219ENST00000492604 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
USP34-219ENST00000492604 LHX8Q68G74 356 aa9.91□□□□□ -0.82
USP34-219ENST00000492604 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
USP34-219ENST00000492604 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
USP34-219ENST00000492604 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
USP34-219ENST00000492604 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
USP34-219ENST00000492604 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
USP34-219ENST00000492604 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
USP34-219ENST00000492604 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
USP34-219ENST00000492604 POTEIP0CG38 1075 aa9.73□□□□□ -0.85
USP34-219ENST00000492604 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
USP34-219ENST00000492604 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
USP34-219ENST00000492604 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
USP34-219ENST00000492604 PLSCR2Q9NRY7 297 aa9.67□□□□□ -0.86
USP34-219ENST00000492604 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
USP34-219ENST00000492604 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
USP34-219ENST00000492604 DCBLD2Q96PD2 775 aa9.57□□□□□ -0.88
USP34-219ENST00000492604 PROM2Q8N271 834 aa9.54□□□□□ -0.88
USP34-219ENST00000492604 CLCN6P51797 869 aa9.51□□□□□ -0.89
USP34-219ENST00000492604 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
USP34-219ENST00000492604 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
USP34-219ENST00000492604 ZNF579Q8NAF0 562 aaKnown RBP9.46□□□□□ -0.9
USP34-219ENST00000492604 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
USP34-219ENST00000492604 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
USP34-219ENST00000492604 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
USP34-219ENST00000492604 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
USP34-219ENST00000492604 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
USP34-219ENST00000492604 POTEMA6NI47 508 aa9.35□□□□□ -0.91
USP34-219ENST00000492604 IFNLR1Q8IU57 520 aaPredicted RBP9.34□□□□□ -0.91
USP34-219ENST00000492604 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms