RNA–Protein interactions for RNA: ENST00000492291.1

GRIA1-206, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 3

Gene GRIA1, Length 419 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-206ENST00000492291 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
GRIA1-206ENST00000492291 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
GRIA1-206ENST00000492291 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
GRIA1-206ENST00000492291 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
GRIA1-206ENST00000492291 FOXD1Q16676 465 aa25.25■■□□□ 1.63
GRIA1-206ENST00000492291 POTEDQ86YR6 584 aa24.83■■□□□ 1.57
GRIA1-206ENST00000492291 MSH5O43196 834 aa23.98■■□□□ 1.43
GRIA1-206ENST00000492291 PIAS4Q8N2W9 510 aaPredicted RBP23.36■■□□□ 1.33
GRIA1-206ENST00000492291 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
GRIA1-206ENST00000492291 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
GRIA1-206ENST00000492291 ADRA2BP18089 450 aa22.8■■□□□ 1.24
GRIA1-206ENST00000492291 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
GRIA1-206ENST00000492291 MAPK8IP2Q13387 824 aaPredicted RBP21.19■□□□□ 0.98
GRIA1-206ENST00000492291 CACNB1Q02641 598 aaPredicted RBP21.05■□□□□ 0.96
GRIA1-206ENST00000492291 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
GRIA1-206ENST00000492291 RNF39Q9H2S5 420 aa20.39■□□□□ 0.85
GRIA1-206ENST00000492291 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
GRIA1-206ENST00000492291 HOXD11P31277 338 aaPredicted RBP20.18■□□□□ 0.82
GRIA1-206ENST00000492291 C1QBPQ07021 282 aaKnown RBP20.05■□□□□ 0.8
GRIA1-206ENST00000492291 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
GRIA1-206ENST00000492291 RNF216Q9NWF9 866 aaPredicted RBP19.8■□□□□ 0.76
GRIA1-206ENST00000492291 CNKSR2Q8WXI2 1034 aa19.74■□□□□ 0.75
GRIA1-206ENST00000492291 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
GRIA1-206ENST00000492291 POTEHQ6S545 545 aa19.29■□□□□ 0.68
GRIA1-206ENST00000492291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
GRIA1-206ENST00000492291 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
GRIA1-206ENST00000492291 DSG3P32926 999 aa18.79■□□□□ 0.6
GRIA1-206ENST00000492291 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
GRIA1-206ENST00000492291 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
GRIA1-206ENST00000492291 CAPN15O75808 1086 aa18.64■□□□□ 0.57
GRIA1-206ENST00000492291 NPM3O75607 178 aaKnown RBP18.6■□□□□ 0.57
GRIA1-206ENST00000492291 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
GRIA1-206ENST00000492291 ZNF219Q9P2Y4 722 aaPredicted RBP18.12■□□□□ 0.49
GRIA1-206ENST00000492291 ABCB7O75027 752 aa18.11■□□□□ 0.49
GRIA1-206ENST00000492291 APLP2Q06481 763 aa18.09■□□□□ 0.49
GRIA1-206ENST00000492291 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
GRIA1-206ENST00000492291 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
GRIA1-206ENST00000492291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
GRIA1-206ENST00000492291 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
GRIA1-206ENST00000492291 CHRDL2Q6WN34 429 aa17.88■□□□□ 0.45
GRIA1-206ENST00000492291 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
GRIA1-206ENST00000492291 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
GRIA1-206ENST00000492291 POLA2Q14181 598 aa17.48■□□□□ 0.39
GRIA1-206ENST00000492291 KCNA4P22459 653 aa17.46■□□□□ 0.39
GRIA1-206ENST00000492291 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
GRIA1-206ENST00000492291 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
GRIA1-206ENST00000492291 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
GRIA1-206ENST00000492291 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
GRIA1-206ENST00000492291 HAX1O00165 279 aa17.16■□□□□ 0.34
GRIA1-206ENST00000492291 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
GRIA1-206ENST00000492291 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
GRIA1-206ENST00000492291 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
GRIA1-206ENST00000492291 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
GRIA1-206ENST00000492291 EVX2Q03828 476 aa16.91■□□□□ 0.3
GRIA1-206ENST00000492291 ATF5Q9Y2D1 282 aaPredicted RBP16.88■□□□□ 0.29
GRIA1-206ENST00000492291 LHX8Q68G74 356 aa16.57■□□□□ 0.24
GRIA1-206ENST00000492291 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
GRIA1-206ENST00000492291 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
GRIA1-206ENST00000492291 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
GRIA1-206ENST00000492291 SPDYE2BA6NHP3 402 aa16.49■□□□□ 0.23
GRIA1-206ENST00000492291 GABBR2O75899 941 aa16.49■□□□□ 0.23
GRIA1-206ENST00000492291 SPDYE6P0CI01 402 aa16.49■□□□□ 0.23
GRIA1-206ENST00000492291 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
GRIA1-206ENST00000492291 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
GRIA1-206ENST00000492291 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
GRIA1-206ENST00000492291 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
GRIA1-206ENST00000492291 FBLN2P98095 1184 aa16.28■□□□□ 0.2
GRIA1-206ENST00000492291 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
GRIA1-206ENST00000492291 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
GRIA1-206ENST00000492291 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
GRIA1-206ENST00000492291 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
GRIA1-206ENST00000492291 PLSCR2Q9NRY7 297 aa16.14■□□□□ 0.17
GRIA1-206ENST00000492291 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
GRIA1-206ENST00000492291 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
GRIA1-206ENST00000492291 ZBTB22O15209 634 aa16.04■□□□□ 0.16
GRIA1-206ENST00000492291 CLCN6P51797 869 aa16.01■□□□□ 0.15
GRIA1-206ENST00000492291 PRR29P0C7W0 189 aa16■□□□□ 0.15
GRIA1-206ENST00000492291 CD44P16070 742 aaKnown RBP15.96■□□□□ 0.15
GRIA1-206ENST00000492291 FARP1Q9Y4F1 1045 aaPredicted RBP15.87■□□□□ 0.13
GRIA1-206ENST00000492291 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
GRIA1-206ENST00000492291 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
GRIA1-206ENST00000492291 ZNF579Q8NAF0 562 aaKnown RBP15.72■□□□□ 0.11
GRIA1-206ENST00000492291 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
GRIA1-206ENST00000492291 POTEMA6NI47 508 aa15.64■□□□□ 0.09
GRIA1-206ENST00000492291 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
GRIA1-206ENST00000492291 POTEB2H3BUK9 544 aa15.59■□□□□ 0.09
GRIA1-206ENST00000492291 GALR2O43603 387 aaPredicted RBP15.55■□□□□ 0.08
GRIA1-206ENST00000492291 POTEGQ6S5H5 508 aa15.55■□□□□ 0.08
GRIA1-206ENST00000492291 PCDH10Q9P2E7 1040 aa15.5■□□□□ 0.07
GRIA1-206ENST00000492291 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
GRIA1-206ENST00000492291 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
GRIA1-206ENST00000492291 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
GRIA1-206ENST00000492291 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
GRIA1-206ENST00000492291 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
GRIA1-206ENST00000492291 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
GRIA1-206ENST00000492291 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
GRIA1-206ENST00000492291 METRNQ9UJH8 293 aa15.22■□□□□ 0.03
GRIA1-206ENST00000492291 LCE2DQ5TA82 110 aaPredicted RBP15.21■□□□□ 0.03
GRIA1-206ENST00000492291 C7P10643 843 aa15.19■□□□□ 0.02
GRIA1-206ENST00000492291 MAMSTRQ6ZN01 415 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms