RNA–Protein interactions for RNA: ENST00000491783.5

TPR-207, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-207ENST00000491783 AEBP2Q6ZN18 517 aaPredicted RBP35.35■■■■□ 3.25
TPR-207ENST00000491783 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
TPR-207ENST00000491783 SENP3Q9H4L4 574 aaPredicted RBP30.28■■■□□ 2.44
TPR-207ENST00000491783 PHF23Q9BUL5 403 aaPredicted RBP30.04■■■□□ 2.4
TPR-207ENST00000491783 FOXD1Q16676 465 aa27.99■■■□□ 2.07
TPR-207ENST00000491783 PLPPR3Q6T4P5 718 aa27.82■■■□□ 2.04
TPR-207ENST00000491783 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
TPR-207ENST00000491783 ADRA2BP18089 450 aa26.56■■□□□ 1.84
TPR-207ENST00000491783 PIAS4Q8N2W9 510 aaPredicted RBP26.35■■□□□ 1.81
TPR-207ENST00000491783 MSH5O43196 834 aa26.13■■□□□ 1.77
TPR-207ENST00000491783 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
TPR-207ENST00000491783 PPP4R3CPQ6ZMV5 832 aa24.39■■□□□ 1.49
TPR-207ENST00000491783 POTEDQ86YR6 584 aa24.23■■□□□ 1.47
TPR-207ENST00000491783 MAPK8IP2Q13387 824 aaPredicted RBP24.16■■□□□ 1.46
TPR-207ENST00000491783 DMRT2Q9Y5R5 561 aa24.06■■□□□ 1.44
TPR-207ENST00000491783 CNKSR2Q8WXI2 1034 aa23.87■■□□□ 1.41
TPR-207ENST00000491783 NCBP3Q53F19 620 aaKnown RBP23.81■■□□□ 1.4
TPR-207ENST00000491783 RNF216Q9NWF9 866 aaPredicted RBP23.49■■□□□ 1.35
TPR-207ENST00000491783 HOXD11P31277 338 aaPredicted RBP23.46■■□□□ 1.35
TPR-207ENST00000491783 KCNA4P22459 653 aa23.33■■□□□ 1.33
TPR-207ENST00000491783 NPM3O75607 178 aaKnown RBP23.26■■□□□ 1.31
TPR-207ENST00000491783 DCAF8L1A6NGE4 600 aa22.96■■□□□ 1.27
TPR-207ENST00000491783 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
TPR-207ENST00000491783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.33■■□□□ 1.172e-8■■□□□ 13.1
TPR-207ENST00000491783 RNF39Q9H2S5 420 aa22.26■■□□□ 1.15
TPR-207ENST00000491783 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
TPR-207ENST00000491783 C1QBPQ07021 282 aaKnown RBP22.08■■□□□ 1.13
TPR-207ENST00000491783 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
TPR-207ENST00000491783 CACNB1Q02641 598 aaPredicted RBP21.93■■□□□ 1.1
TPR-207ENST00000491783 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
TPR-207ENST00000491783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
TPR-207ENST00000491783 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
TPR-207ENST00000491783 FOXD4L1Q9NU39 408 aa21.7■■□□□ 1.06
TPR-207ENST00000491783 APLP2Q06481 763 aa21.62■■□□□ 1.05
TPR-207ENST00000491783 MYCNP04198 464 aaPredicted RBP21.61■■□□□ 1.05
TPR-207ENST00000491783 SAMD1Q6SPF0 538 aaPredicted RBP21.55■■□□□ 1.04
TPR-207ENST00000491783 ZBTB22O15209 634 aa21.38■■□□□ 1.01
TPR-207ENST00000491783 CAPN15O75808 1086 aa21.31■■□□□ 1
TPR-207ENST00000491783 SPINK5Q9NQ38 1064 aaPredicted RBP21.29■■□□□ 1
TPR-207ENST00000491783 ZNF219Q9P2Y4 722 aaPredicted RBP21.24■□□□□ 0.99
TPR-207ENST00000491783 ATXN8OSP0DMR3 200 aa21.11■□□□□ 0.97
TPR-207ENST00000491783 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
TPR-207ENST00000491783 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
TPR-207ENST00000491783 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
TPR-207ENST00000491783 DSG3P32926 999 aa21.04■□□□□ 0.96
TPR-207ENST00000491783 ATF5Q9Y2D1 282 aaPredicted RBP20.84■□□□□ 0.93
TPR-207ENST00000491783 ABCB7O75027 752 aa20.77■□□□□ 0.92
TPR-207ENST00000491783 POLA2Q14181 598 aa20.71■□□□□ 0.91
TPR-207ENST00000491783 ZBTB12Q9Y330 459 aaPredicted RBP20.54■□□□□ 0.88
TPR-207ENST00000491783 FBLN2P98095 1184 aa20.25■□□□□ 0.83
TPR-207ENST00000491783 RBM42Q9BTD8 480 aaKnown RBP20.24■□□□□ 0.83
TPR-207ENST00000491783 MKRN4PQ13434 485 aaPredicted RBP19.96■□□□□ 0.79
TPR-207ENST00000491783 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
TPR-207ENST00000491783 SPDYE2BA6NHP3 402 aa19.89■□□□□ 0.77
TPR-207ENST00000491783 SPDYE6P0CI01 402 aa19.89■□□□□ 0.77
TPR-207ENST00000491783 SPDYE2Q495Y8 402 aa19.89■□□□□ 0.77
TPR-207ENST00000491783 AKT1S1Q96B36 256 aa19.85■□□□□ 0.77
TPR-207ENST00000491783 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
TPR-207ENST00000491783 SSUH2Q9Y2M2 353 aa19.61■□□□□ 0.73
TPR-207ENST00000491783 REM2Q8IYK8 340 aaPredicted RBP19.57■□□□□ 0.72
TPR-207ENST00000491783 SPDYE4A6NLX3 237 aa19.46■□□□□ 0.71
TPR-207ENST00000491783 CHRDL2Q6WN34 429 aa19.39■□□□□ 0.69
TPR-207ENST00000491783 SPDYE1Q8NFV5 336 aaPredicted RBP19.38■□□□□ 0.69
TPR-207ENST00000491783 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
TPR-207ENST00000491783 PITPNM1O00562 1244 aa19.29■□□□□ 0.68
TPR-207ENST00000491783 CLEC11AQ9Y240 323 aa19.19■□□□□ 0.66
TPR-207ENST00000491783 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
TPR-207ENST00000491783 POTEHQ6S545 545 aa19.16■□□□□ 0.66
TPR-207ENST00000491783 PROM2Q8N271 834 aa19.11■□□□□ 0.65
TPR-207ENST00000491783 FKBP8Q14318 412 aa19.09■□□□□ 0.65
TPR-207ENST00000491783 FXR2P51116 673 aaKnown RBP eCLIP19.08■□□□□ 0.643e-7■■□□□ 13.8
TPR-207ENST00000491783 PRR29P0C7W0 189 aa19.05■□□□□ 0.64
TPR-207ENST00000491783 PIP4P2Q8N4L2 257 aa19.02■□□□□ 0.64
TPR-207ENST00000491783 PRKAR2AP13861 404 aaKnown RBP18.84■□□□□ 0.61
TPR-207ENST00000491783 FBXO3Q9UK99 471 aa18.72■□□□□ 0.59
TPR-207ENST00000491783 CHADLQ6NUI6 762 aa18.66■□□□□ 0.58
TPR-207ENST00000491783 CREBZFQ9NS37 354 aa18.63■□□□□ 0.57
TPR-207ENST00000491783 PLEKHG5O94827 1062 aa18.61■□□□□ 0.57
TPR-207ENST00000491783 FARP1Q9Y4F1 1045 aaPredicted RBP18.59■□□□□ 0.57
TPR-207ENST00000491783 HAX1O00165 279 aa18.55■□□□□ 0.56
TPR-207ENST00000491783 MIER1Q8N108 512 aa18.51■□□□□ 0.55
TPR-207ENST00000491783 NPM1P06748 294 aaKnown RBP eCLIP18.49■□□□□ 0.55
TPR-207ENST00000491783 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
TPR-207ENST00000491783 C19orf67A6NJJ6 358 aa18.43■□□□□ 0.54
TPR-207ENST00000491783 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
TPR-207ENST00000491783 MNX1P50219 401 aaPredicted RBP18.39■□□□□ 0.53
TPR-207ENST00000491783 VASPP50552 380 aaPredicted RBP18.31■□□□□ 0.52
TPR-207ENST00000491783 CD44P16070 742 aaKnown RBP18.29■□□□□ 0.52
TPR-207ENST00000491783 SP7Q8TDD2 431 aaPredicted RBP18.28■□□□□ 0.52
TPR-207ENST00000491783 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
TPR-207ENST00000491783 CLCN6P51797 869 aa18.23■□□□□ 0.51
TPR-207ENST00000491783 EVX2Q03828 476 aa18.2■□□□□ 0.5
TPR-207ENST00000491783 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
TPR-207ENST00000491783 KLHL34Q8N239 644 aa18.1■□□□□ 0.49
TPR-207ENST00000491783 ZNF579Q8NAF0 562 aaKnown RBP18.08■□□□□ 0.48
TPR-207ENST00000491783 NUBP1P53384 320 aa18.03■□□□□ 0.48
TPR-207ENST00000491783 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
TPR-207ENST00000491783 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
TPR-207ENST00000491783 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
TPR-207ENST00000491783 FAM212AQ96EL1 285 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms